<p>Box plots indicate the posterior predictive distributions of the mean (a, c, e) and coefficient of variation (b, d, f) for nucleotide diversity (a, b), <i>Φ<sub>st</sub></i> (c, d), and Tajima's <i>D</i> (e, f) simulated for a 22-locus dataset (or a 16-locus dataset in the selection model) with 1,000 replicates; horizontal lines indicate the 95% confidence limits. Lightly shaded squares mark the values for empirical data that fell within the 95% confidence intervals; dark shading indicates empirical values that fell within the 2.5% tails of the posterior predictive distributions.</p
a) The regression standard error, where (weighted sum of squared deviations) and ν = 30−1 (degree ...
a) The regression standard error, where (weighted sum of squared deviations) and ν = 30−1 (degree ...
a<p>length of analyzed resequenced region (in kb);</p>b<p>population;</p>c<p>number of segregating s...
<p>Box plots indicate the posterior predictive distributions for each locus (1,000 replicates; horiz...
<p>Summary of posterior distributions of Goodness-of-fit measures (5, 50 and 95% quantiles) for the ...
<p>Comparison of the predictions of our models (gray-shaded areas, showing 95% CIs of model realizat...
<p>Boxplots show the average CVRMSD for local ancestry frequencies for each of 10 replicate simulati...
FIGURE S3. The effects of species-specific positive selection on posterior probabilities of species ...
<p>Bayes factor (measure of confidence) and the resulting posterior probability (Post. Prob.) for th...
<p>Bar heights are the mean allele counts averaged over 10 simulations, and error bars denote one st...
Each individual plot depicts the ratio of the mean fitness of the recipient population (wR) to the d...
<p>Comparison of the four demographic models in retrieve the haplotype (<i>h</i>) and nucleotide (<i...
<div><p>(A and B) The significance of observed values of Tajima's D (red), Fu and Li's D* (pale yell...
#<p>Details of demographic scenarios tested and estimated parameters are given in <a href="http://ww...
<p>The input parameters for the simulations were as follows: (A) θ<sub>1</sub> = 10; (B) θ<sub>2</su...
a) The regression standard error, where (weighted sum of squared deviations) and ν = 30−1 (degree ...
a) The regression standard error, where (weighted sum of squared deviations) and ν = 30−1 (degree ...
a<p>length of analyzed resequenced region (in kb);</p>b<p>population;</p>c<p>number of segregating s...
<p>Box plots indicate the posterior predictive distributions for each locus (1,000 replicates; horiz...
<p>Summary of posterior distributions of Goodness-of-fit measures (5, 50 and 95% quantiles) for the ...
<p>Comparison of the predictions of our models (gray-shaded areas, showing 95% CIs of model realizat...
<p>Boxplots show the average CVRMSD for local ancestry frequencies for each of 10 replicate simulati...
FIGURE S3. The effects of species-specific positive selection on posterior probabilities of species ...
<p>Bayes factor (measure of confidence) and the resulting posterior probability (Post. Prob.) for th...
<p>Bar heights are the mean allele counts averaged over 10 simulations, and error bars denote one st...
Each individual plot depicts the ratio of the mean fitness of the recipient population (wR) to the d...
<p>Comparison of the four demographic models in retrieve the haplotype (<i>h</i>) and nucleotide (<i...
<div><p>(A and B) The significance of observed values of Tajima's D (red), Fu and Li's D* (pale yell...
#<p>Details of demographic scenarios tested and estimated parameters are given in <a href="http://ww...
<p>The input parameters for the simulations were as follows: (A) θ<sub>1</sub> = 10; (B) θ<sub>2</su...
a) The regression standard error, where (weighted sum of squared deviations) and ν = 30−1 (degree ...
a) The regression standard error, where (weighted sum of squared deviations) and ν = 30−1 (degree ...
a<p>length of analyzed resequenced region (in kb);</p>b<p>population;</p>c<p>number of segregating s...