<p>LD plots are presented for African-American controls (A and B) and for European-American/Argentinean controls (C and D) including both D′ and r<sup>2</sup>. All figures are oriented 5′ to 3′, right to left, relative to the gene orientation on the minus strand. D′ (shades of red) and r<sup>2</sup> (shades of black) are indicated in percentages within squares in the LD plots, with solid blocks without numbers indicating D′ and r<sup>2</sup> = 1. Strong LD is indicated by red or dark gray, while pink and light gray and white indicate uninformative and low confidence values, respectively. LD Blocks were created with the default algorithm in HaploView that creates 95% confidence bounds on D′ considered being in strong LD where 95% of the comp...
<p>Darker color indicates higher linkage disequilibrium (LD), lighter color indicates less LD. Numbe...
<p>SNPs are colored by their LD (<i>r<sup>2</sup></i>) in the same sample with rs17231520.</p
Horizontal lines represent the 4-SNP windows. X-axis shows the SNPs genotyped in the regions based o...
<p>The figures are oriented 5’ to 3’, right to left, relative to the gene orientation on the minus s...
<p>The values in the cells are the pairwise degree of LD indicated by <i>r<sup>2</sup></i>×100. <i>r...
Horizontal lines represent the 4-SNP windows. X-axis shows the SNPs genotyped in the regions based o...
<p>Graphical representation of the haplotype structure of the 3′-UTR region: African-American popula...
<p>The LD blocks were defined by confidence intervals according to Gabriel and colleagues <a href="h...
<p>Plots generated using Haploview v3.2 <a href="http://www.plosone.org/article/info:doi/10.1371/jou...
<p>The LDL-C association signal near the <i>CELSR2/PSRC1/SORT1</i> locus is narrower in African Amer...
<p>Haplotype windows for LDL-C (<b>a</b>), for ApoB (<b>b</b>), for HDL-C (<b>c</b>), and for TG (<b...
<p>The position of the 6 SNPs within the <i>ATG5</i> gene are shown above the plot. <i>D’</i> values...
<p>The plot depicts the haplotype block containing the rs71305152 indel for the HapMap CHB (Han Chin...
Horizontal lines represent the 4-SNP windows. X-axis shows the SNPs genotyped in the regions based o...
<p>Frequency data for SNPs in CFTR (<u>Panel A</u>) or NF1 (<u>Panel B</u>) were collated for each o...
<p>Darker color indicates higher linkage disequilibrium (LD), lighter color indicates less LD. Numbe...
<p>SNPs are colored by their LD (<i>r<sup>2</sup></i>) in the same sample with rs17231520.</p
Horizontal lines represent the 4-SNP windows. X-axis shows the SNPs genotyped in the regions based o...
<p>The figures are oriented 5’ to 3’, right to left, relative to the gene orientation on the minus s...
<p>The values in the cells are the pairwise degree of LD indicated by <i>r<sup>2</sup></i>×100. <i>r...
Horizontal lines represent the 4-SNP windows. X-axis shows the SNPs genotyped in the regions based o...
<p>Graphical representation of the haplotype structure of the 3′-UTR region: African-American popula...
<p>The LD blocks were defined by confidence intervals according to Gabriel and colleagues <a href="h...
<p>Plots generated using Haploview v3.2 <a href="http://www.plosone.org/article/info:doi/10.1371/jou...
<p>The LDL-C association signal near the <i>CELSR2/PSRC1/SORT1</i> locus is narrower in African Amer...
<p>Haplotype windows for LDL-C (<b>a</b>), for ApoB (<b>b</b>), for HDL-C (<b>c</b>), and for TG (<b...
<p>The position of the 6 SNPs within the <i>ATG5</i> gene are shown above the plot. <i>D’</i> values...
<p>The plot depicts the haplotype block containing the rs71305152 indel for the HapMap CHB (Han Chin...
Horizontal lines represent the 4-SNP windows. X-axis shows the SNPs genotyped in the regions based o...
<p>Frequency data for SNPs in CFTR (<u>Panel A</u>) or NF1 (<u>Panel B</u>) were collated for each o...
<p>Darker color indicates higher linkage disequilibrium (LD), lighter color indicates less LD. Numbe...
<p>SNPs are colored by their LD (<i>r<sup>2</sup></i>) in the same sample with rs17231520.</p
Horizontal lines represent the 4-SNP windows. X-axis shows the SNPs genotyped in the regions based o...