Immune relevant protein domains in the Mytilus edulis transcriptome: number of contigs which show immune system relevant proteins domains assigned by InterProScan.

Sequence analysis of a normalized cDNA library of Mytilus edulis hemocytes exposed to Vibrio splendidus LGP32 strain

Tanguy, Marion
McKenna, Patty
Gauthier-Clerc, Sophie
Pellerin, Jocelyne
Danger, Jean-Michel
Siah, Ahmed

December 2013

AbstractIn the past decades, reports on bivalves' pathogens and associated mortalities have steadily...

Primer sequences used for qRT-PCR analysis of tissue specific expression of selected contigs with putative immune function identified by BLAST and domain analysis in Mytilus edulis.

Eva E. R. Philipp (133863)
Lars Kraemer (133880)
Frank Melzner (178392)
Albert J. Poustka (42599)
Sebastian Thieme (178398)
Ulrike Findeisen (178401)
Stefan Schreiber (36915)
Philip Rosenstiel (68103)

March 2012

Primer sequences used for qRT-PCR analysis of tissue specific expression of selected contigs with...

Domains of RNAi proteins.

Kenlee Nakasugi (109354)
Ross N. Crowhurst (109357)
Julia Bally (204199)
Craig C. Wood (109371)
Roger P. Hellens (109364)
Peter M. Waterhouse (109368)

March 2013

The figure shows the domains of the RNAi proteins AGO, DCL, DRB and RDR from N. benthamiana</i...

Analysis of immune-relevant genes differentially represented between BgBAR, BgVEN, BgGUA and BgBRE reference transcriptome.

Richard Galinier (269394)
Emmanuel Roger (269378)
Yves Moné (361940)
David Duval (178941)
Anaïs Portet (3808957)
Silvain Pinaud (843743)
Cristian Chaparro (257079)
Christoph Grunau (269384)
Clémence Genthon (3249750)
Emeric Dubois (3808954)
Anne Rognon (496527)
Nathalie Arancibia (696247)
Bernard Dejean (3808960)
André Théron (696248)
Benjamin Gourbal (178936)
Guillaume Mitta (107528)

March 2017

(A) Histograms showing the proportion of genes bearing immune-relevant protein domains that were ...

Toll-like receptor like contigs identified in Mytilus edulis by blast annotation and domain search.

Eva E. R. Philipp (133863)
Lars Kraemer (133880)
Frank Melzner (178392)
Albert J. Poustka (42599)
Sebastian Thieme (178398)
Ulrike Findeisen (178401)
Stefan Schreiber (36915)
Philip Rosenstiel (68103)

March 2012

Toll-like receptor like contigs identified in Mytilus edulis by blast annotation and domai...

Number of unigenes related to immune-related molecules.

Songqing Wu (2184277)
Xiaoli Zhu (767993)
Zhaoxia Liu (2184283)
Ensi Shao (2184274)
Carballar-Lejarazú Rebeca (2184265)
Yajie Guo (518157)
Yueting Xiong (2184271)
Yani Mou (2184280)
Runxue Xu (2184262)
Xia Hu (767914)
Guanghong Liang (2184286)
Shuangquan Zou (2184268)
Xiong Guan (423435)
Feiping Zhang (2184259)

January 2016

x-axis indicates the corresponding number of unigenes and y-axis indicates the specific unigenes ...

Major categories of protein domains identified by InterProScan for A. irradians and P. magellanicus adult eye transcriptomes.

Autum N. Pairett (438572)
Jeanne M. Serb (242560)

July 2013

Major categories of protein domains identified by InterProScan for A. irradians and P. ...

Top canonical pathways and protein domains enriched among the 445 genes associated with intrauterine inflammation markers.

Sloane K. Tilley (1584925)
Robert M. Joseph (430555)
Karl C. K. Kuban (707066)
Olaf U. Dammann (4020098)
T. Michael O’Shea (707067)
Rebecca C. Fry (36658)

May 2017

Top canonical pathways and protein domains enriched among the 445 genes associated with intrauter...

Sequence analysis of a normalized cDNA library of Mytilus edulis hemocytes exposed to Vibrio splendidus LGP32 strain

Tanguy, Marion (Author)
McKenna, Patty (Author)
Gauthier-Clerc, Sophie (Author)
Pellerin, Jocelyne (Author)
Danger, Jean-Michel (Author)
Siah, Ahmed (Author)

January 2013

In the past decades, reports on bivalves' pathogens and associated mortalities have steadily increas...

Immune system proteins and their respective accession numbers in the swab sample of the Maiden identified by mass spectrometry.

Angelique Corthals (147778)
Antonius Koller (147783)
Dwight W. Martin (147788)
Robert Rieger (147792)
Emily I. Chen (147797)
Mario Bernaski (147802)
Gabriella Recagno (147807)
Liliana M. Dávalos (147812)

July 2012

Numbers in the last three columns indicate the number of unique peptides, the number of spectra o...

The intriguing immune-related genes identified in the turbot transcriptome.

Deyou Ma (442620)
Aijun Ma (792033)
Zhihui Huang (2541538)
Guangning Wang (2541544)
Ting Wang (16292)
Dandan Xia (2541547)
Benhe Ma (2541541)

February 2016

The intriguing immune-related genes identified in the turbot transcriptome.</p

Integration of Transcriptomics and Proteomics Improves the Characterization of the Role of Mussel Gills in a Bacterial Waterborne Infection

Amaro Saco
Antonella Panebianco
Antonella Panebianco
Sofía Blanco
Sofía Blanco
Beatriz Novoa
Angel P. Diz
Angel P. Diz
Antonio Figueras

October 2021

In recent years, the immune response of mussels (Mytilus galloprovincialis) has been studied at the ...

The expression patterns of immune-related genes in sample M and sample T of the Venus clam, Cyclina sinensis.

Baoping Pan (719202)
Yipeng Ren (719203)
Jing Gao (69330)
Hong Gao (68166)

April 2015

The selected immune-related genes include alpha-2-macroglobulin(A2M), bactericidal permeability-i...

Biological functional categories of immune factors identified in saliva and rectal lavage fluid according to their gene ontology.

Laura M. Romas (590439)
Klara Hasselrot (302935)
Lindsay G. Aboud (590440)
Kenzie D. Birse (590441)
T. Blake Ball (149578)
Kristina Broliden (60331)
Adam D. Burgener (590442)

June 2014

Proteins identified in both rectal and salivary mucosal fluid pools were annotated by function us...

Data on conserved domains of putative immunogenic proteins against P. gingivalis using NCBI Conserved Domain Database, EggNOG and STRING databases.

Omid Nasiri (13531549)
Mahsa Hajihassani (13531552)
Narjes Noori Goodarzi (13531555)
Sepideh Fereshteh (13531558)
Negin Bolourchi (11599557)
Farzaneh Firoozeh (8263113)
Omid Azizi (13531561)
Farzad Badmasti (9327920)

August 2022

Data on conserved domains of putative immunogenic proteins against P. gingivalis using NCBI Conserve...

Sequence analysis of a normalized cDNA library of Mytilus edulis hemocytes exposed to Vibrio splendidus LGP32 strain

Tanguy, Marion
McKenna, Patty
Gauthier-Clerc, Sophie
Pellerin, Jocelyne
Danger, Jean-Michel
Siah, Ahmed

December 2013

AbstractIn the past decades, reports on bivalves' pathogens and associated mortalities have steadily...

Primer sequences used for qRT-PCR analysis of tissue specific expression of selected contigs with putative immune function identified by BLAST and domain analysis in Mytilus edulis.

Eva E. R. Philipp (133863)
Lars Kraemer (133880)
Frank Melzner (178392)
Albert J. Poustka (42599)
Sebastian Thieme (178398)
Ulrike Findeisen (178401)
Stefan Schreiber (36915)
Philip Rosenstiel (68103)

March 2012

Primer sequences used for qRT-PCR analysis of tissue specific expression of selected contigs with...

Domains of RNAi proteins.

Kenlee Nakasugi (109354)
Ross N. Crowhurst (109357)
Julia Bally (204199)
Craig C. Wood (109371)
Roger P. Hellens (109364)
Peter M. Waterhouse (109368)

March 2013

The figure shows the domains of the RNAi proteins AGO, DCL, DRB and RDR from N. benthamiana</i...

Analysis of immune-relevant genes differentially represented between BgBAR, BgVEN, BgGUA and BgBRE reference transcriptome.

Richard Galinier (269394)
Emmanuel Roger (269378)
Yves Moné (361940)
David Duval (178941)
Anaïs Portet (3808957)
Silvain Pinaud (843743)
Cristian Chaparro (257079)
Christoph Grunau (269384)
Clémence Genthon (3249750)
Emeric Dubois (3808954)
Anne Rognon (496527)
Nathalie Arancibia (696247)
Bernard Dejean (3808960)
André Théron (696248)
Benjamin Gourbal (178936)
Guillaume Mitta (107528)

March 2017

(A) Histograms showing the proportion of genes bearing immune-relevant protein domains that were ...

Toll-like receptor like contigs identified in Mytilus edulis by blast annotation and domain search.

Eva E. R. Philipp (133863)
Lars Kraemer (133880)
Frank Melzner (178392)
Albert J. Poustka (42599)
Sebastian Thieme (178398)
Ulrike Findeisen (178401)
Stefan Schreiber (36915)
Philip Rosenstiel (68103)

March 2012

Toll-like receptor like contigs identified in Mytilus edulis by blast annotation and domai...

Number of unigenes related to immune-related molecules.

Songqing Wu (2184277)
Xiaoli Zhu (767993)
Zhaoxia Liu (2184283)
Ensi Shao (2184274)
Carballar-Lejarazú Rebeca (2184265)
Yajie Guo (518157)
Yueting Xiong (2184271)
Yani Mou (2184280)
Runxue Xu (2184262)
Xia Hu (767914)
Guanghong Liang (2184286)
Shuangquan Zou (2184268)
Xiong Guan (423435)
Feiping Zhang (2184259)

January 2016

x-axis indicates the corresponding number of unigenes and y-axis indicates the specific unigenes ...

Major categories of protein domains identified by InterProScan for A. irradians and P. magellanicus adult eye transcriptomes.

Autum N. Pairett (438572)
Jeanne M. Serb (242560)

July 2013

Major categories of protein domains identified by InterProScan for A. irradians and P. ...

Top canonical pathways and protein domains enriched among the 445 genes associated with intrauterine inflammation markers.

Sloane K. Tilley (1584925)
Robert M. Joseph (430555)
Karl C. K. Kuban (707066)
Olaf U. Dammann (4020098)
T. Michael O’Shea (707067)
Rebecca C. Fry (36658)

May 2017

Top canonical pathways and protein domains enriched among the 445 genes associated with intrauter...

Sequence analysis of a normalized cDNA library of Mytilus edulis hemocytes exposed to Vibrio splendidus LGP32 strain

Tanguy, Marion (Author)
McKenna, Patty (Author)
Gauthier-Clerc, Sophie (Author)
Pellerin, Jocelyne (Author)
Danger, Jean-Michel (Author)
Siah, Ahmed (Author)

January 2013

In the past decades, reports on bivalves' pathogens and associated mortalities have steadily increas...

Immune system proteins and their respective accession numbers in the swab sample of the Maiden identified by mass spectrometry.

Angelique Corthals (147778)
Antonius Koller (147783)
Dwight W. Martin (147788)
Robert Rieger (147792)
Emily I. Chen (147797)
Mario Bernaski (147802)
Gabriella Recagno (147807)
Liliana M. Dávalos (147812)

July 2012

Numbers in the last three columns indicate the number of unique peptides, the number of spectra o...

The intriguing immune-related genes identified in the turbot transcriptome.

Deyou Ma (442620)
Aijun Ma (792033)
Zhihui Huang (2541538)
Guangning Wang (2541544)
Ting Wang (16292)
Dandan Xia (2541547)
Benhe Ma (2541541)

February 2016

The intriguing immune-related genes identified in the turbot transcriptome.</p

Integration of Transcriptomics and Proteomics Improves the Characterization of the Role of Mussel Gills in a Bacterial Waterborne Infection

Amaro Saco
Antonella Panebianco
Antonella Panebianco
Sofía Blanco
Sofía Blanco
Beatriz Novoa
Angel P. Diz
Angel P. Diz
Antonio Figueras

October 2021

In recent years, the immune response of mussels (Mytilus galloprovincialis) has been studied at the ...

The expression patterns of immune-related genes in sample M and sample T of the Venus clam, Cyclina sinensis.

Baoping Pan (719202)
Yipeng Ren (719203)
Jing Gao (69330)
Hong Gao (68166)

April 2015

The selected immune-related genes include alpha-2-macroglobulin(A2M), bactericidal permeability-i...

Biological functional categories of immune factors identified in saliva and rectal lavage fluid according to their gene ontology.

Laura M. Romas (590439)
Klara Hasselrot (302935)
Lindsay G. Aboud (590440)
Kenzie D. Birse (590441)
T. Blake Ball (149578)
Kristina Broliden (60331)
Adam D. Burgener (590442)

June 2014

Proteins identified in both rectal and salivary mucosal fluid pools were annotated by function us...

Data on conserved domains of putative immunogenic proteins against P. gingivalis using NCBI Conserved Domain Database, EggNOG and STRING databases.

Omid Nasiri (13531549)
Mahsa Hajihassani (13531552)
Narjes Noori Goodarzi (13531555)
Sepideh Fereshteh (13531558)
Negin Bolourchi (11599557)
Farzaneh Firoozeh (8263113)
Omid Azizi (13531561)
Farzad Badmasti (9327920)

August 2022

Data on conserved domains of putative immunogenic proteins against P. gingivalis using NCBI Conserve...

Sequence analysis of a normalized cDNA library of Mytilus edulis hemocytes exposed to Vibrio splendidus LGP32 strain

Tanguy, Marion
McKenna, Patty
Gauthier-Clerc, Sophie
Pellerin, Jocelyne
Danger, Jean-Michel
Siah, Ahmed

December 2013

AbstractIn the past decades, reports on bivalves' pathogens and associated mortalities have steadily...

Primer sequences used for qRT-PCR analysis of tissue specific expression of selected contigs with putative immune function identified by BLAST and domain analysis in Mytilus edulis.

Eva E. R. Philipp (133863)
Lars Kraemer (133880)
Frank Melzner (178392)
Albert J. Poustka (42599)
Sebastian Thieme (178398)
Ulrike Findeisen (178401)
Stefan Schreiber (36915)
Philip Rosenstiel (68103)

March 2012

Primer sequences used for qRT-PCR analysis of tissue specific expression of selected contigs with...

Domains of RNAi proteins.

Kenlee Nakasugi (109354)
Ross N. Crowhurst (109357)
Julia Bally (204199)
Craig C. Wood (109371)
Roger P. Hellens (109364)
Peter M. Waterhouse (109368)

March 2013

The figure shows the domains of the RNAi proteins AGO, DCL, DRB and RDR from N. benthamiana</i...

Immune relevant protein domains in the <i>Mytilus edulis</i> transcriptome: number of contigs which show immune system relevant proteins domains assigned by InterProScan.

Abstract

Extracted data

Immune relevant protein domains in the <i>Mytilus edulis</i> transcriptome: number of contigs which show immune system relevant proteins domains assigned by InterProScan.

Abstract

Extracted data

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