<p>Comparison of proteome and transcriptome changes in response to P deficiency. Fold-change presented as the log<sub>2</sub> of the ratio of deficient∶replete conditions. Unity lines are shown in grey solid (fold-change = 1), while a linear regression (log<sub>2</sub>[proteins] = 0.49*log<sub>2</sub>[transcripts]-0.25) of proteins that are >2-fold in abundance in either treatment against their corresponding transcripts is shown in yellow (r<sup>2</sup> = 0.53). The dashed line is the 1∶1 line denoting equal fold change between the deficient and replete conditions for the transcriptome and the proteome. Proteins and transcripts of interest that correspond to P-metabolism, glycolysis and ribosomes/translation are highlighted.</p
<p>Using only proteins that were differentially abundant at each stage, the glycolysis pathway was i...
<p>The biomarkers as well as the respective functions and log<sub>2</sub> ratios are depicted. Log<s...
<p>A) Individual lists of proteins that changed by at least 1.5-fold were compared to the mRNA data ...
<p>Proteins were sorted by log<sub>2</sub> abundance ratio at both 24 h (A) and 48 h (B) and plotted...
This represents the matched protein (y-axis) and mRNA (x-axis) z-score normalized, log2 fold changes...
<p><b>(A)</b> Representative 2-D gel showing spot numbers of identified proteins. Red spots represen...
<p>The correlation between transcript level and protein output is low, opening up a corridor for pos...
a<p>The p-value associated with fold-change calculated using a Student’s t-test.</p>b<p>The fold-cha...
<p>Protein and corresponding gene expression ratios of all identified proteins including the MS/MS d...
a<p><b>:</b> The direction of comparison; <b>1</b>: from significant protein list to identify their ...
<p>The transcript expression fold changes measured by RNA-seq and qPCR are indicated by dark grey an...
<p>Differential protein expression between <i>N-Ino</i> and <i>Ino</i> was revealed by 2D gel electr...
<p>Comparison of relative gene expression fold in transcriptome data and qPCR results.</p
<p>The x-axis shows the 15 selected genes, while the y-axis gives the fold change observed for the L...
<p>Fold changes are expressed as the ratio of gene expression between XGC and YRC after normalizatio...
<p>Using only proteins that were differentially abundant at each stage, the glycolysis pathway was i...
<p>The biomarkers as well as the respective functions and log<sub>2</sub> ratios are depicted. Log<s...
<p>A) Individual lists of proteins that changed by at least 1.5-fold were compared to the mRNA data ...
<p>Proteins were sorted by log<sub>2</sub> abundance ratio at both 24 h (A) and 48 h (B) and plotted...
This represents the matched protein (y-axis) and mRNA (x-axis) z-score normalized, log2 fold changes...
<p><b>(A)</b> Representative 2-D gel showing spot numbers of identified proteins. Red spots represen...
<p>The correlation between transcript level and protein output is low, opening up a corridor for pos...
a<p>The p-value associated with fold-change calculated using a Student’s t-test.</p>b<p>The fold-cha...
<p>Protein and corresponding gene expression ratios of all identified proteins including the MS/MS d...
a<p><b>:</b> The direction of comparison; <b>1</b>: from significant protein list to identify their ...
<p>The transcript expression fold changes measured by RNA-seq and qPCR are indicated by dark grey an...
<p>Differential protein expression between <i>N-Ino</i> and <i>Ino</i> was revealed by 2D gel electr...
<p>Comparison of relative gene expression fold in transcriptome data and qPCR results.</p
<p>The x-axis shows the 15 selected genes, while the y-axis gives the fold change observed for the L...
<p>Fold changes are expressed as the ratio of gene expression between XGC and YRC after normalizatio...
<p>Using only proteins that were differentially abundant at each stage, the glycolysis pathway was i...
<p>The biomarkers as well as the respective functions and log<sub>2</sub> ratios are depicted. Log<s...
<p>A) Individual lists of proteins that changed by at least 1.5-fold were compared to the mRNA data ...