<p>Relative affinity of a MarA variant for a given site as determined by MITOMI (<a href="http://www.plosgenetics.org/article/info:doi/10.1371/journal.pgen.1002614#pgen-1002614-g004" target="_blank">Figure 4</a>) vs. the quantity of <i>tet</i> gene expressed. Expression levels were monitored by Q-PCR. We show data for wild type WQR MarA (orange diamonds) and the RQR mutant (blue squares). The transcriptional output was normalized with wild type MarA bound to its consensus site of ‘GCA’ = 1.</p
(A) Venn diagram showing the number of nhr-86-dependent, R24-induced genes in the mRNA-seq experimen...
<p>Silenced and Expressed group targeted gene expression, and LacZ reporter gene expression, are pre...
<p>A: As proof of principle, 48 different colonies of the WT and W127A Apobec3G bait were picked and...
<p>A schematic representation of the respecification of wild type MarA (WQR) to an orthogonal binder...
<p><b>(A)</b> Histogram of the estimated MarA levels in wild type cells (<a href="http://www.ploscom...
<p>qRT PCR of directly regulated genes in the <i>dr0997</i> mutant relative to wild-type R1.</p
[[abstract]]In this study, the relative abundance of splicing variants of Oreochromis non-NMDA subty...
<p>Each point represents the difference in transcript levels of selected genes in <i>rgg2</i> mutant...
<p>A) Difference plot graphic displays of the post-PCR HRM melting curve analysis of the <i>rpoB</i>...
(A) Schematic representation of the qua1-1 locus, including primer pair positions (probe 1–4) for qC...
A) qRT-PCR of select ORR and IPR genes. * = Gene belongs to ORR and IPR, # = Gene belongs to only IP...
<p>Nine genes were quantitated by qRT-PCR across all 6 tissues at 24 h. (A) Scatter plot of all gene...
<p>The genes are shown with functional information extracted from Flybase. Expression changes (log2 ...
(A) Schematic representation of the QUA1 gene, including primer pair positions for qChIP. (B) qChIP ...
ns, not significant compared to the wild-type PAO1 strain based on Student’s t test. (TIF)</p
(A) Venn diagram showing the number of nhr-86-dependent, R24-induced genes in the mRNA-seq experimen...
<p>Silenced and Expressed group targeted gene expression, and LacZ reporter gene expression, are pre...
<p>A: As proof of principle, 48 different colonies of the WT and W127A Apobec3G bait were picked and...
<p>A schematic representation of the respecification of wild type MarA (WQR) to an orthogonal binder...
<p><b>(A)</b> Histogram of the estimated MarA levels in wild type cells (<a href="http://www.ploscom...
<p>qRT PCR of directly regulated genes in the <i>dr0997</i> mutant relative to wild-type R1.</p
[[abstract]]In this study, the relative abundance of splicing variants of Oreochromis non-NMDA subty...
<p>Each point represents the difference in transcript levels of selected genes in <i>rgg2</i> mutant...
<p>A) Difference plot graphic displays of the post-PCR HRM melting curve analysis of the <i>rpoB</i>...
(A) Schematic representation of the qua1-1 locus, including primer pair positions (probe 1–4) for qC...
A) qRT-PCR of select ORR and IPR genes. * = Gene belongs to ORR and IPR, # = Gene belongs to only IP...
<p>Nine genes were quantitated by qRT-PCR across all 6 tissues at 24 h. (A) Scatter plot of all gene...
<p>The genes are shown with functional information extracted from Flybase. Expression changes (log2 ...
(A) Schematic representation of the QUA1 gene, including primer pair positions for qChIP. (B) qChIP ...
ns, not significant compared to the wild-type PAO1 strain based on Student’s t test. (TIF)</p
(A) Venn diagram showing the number of nhr-86-dependent, R24-induced genes in the mRNA-seq experimen...
<p>Silenced and Expressed group targeted gene expression, and LacZ reporter gene expression, are pre...
<p>A: As proof of principle, 48 different colonies of the WT and W127A Apobec3G bait were picked and...