Proteins in mPanc96 cells identified by mass spectrometry whose rates of syntheses decrease when cultured on soft gels.

Proteins with altered abundance in SDL (all gels, change in average ratio between 1.3 and 2, with a t-test of p<0.05).

Stéphanie Pellegrin (157375)
Kate J. Heesom (157385)
Timothy J. Satchwell (157395)
Bethan R. Hawley (157404)
Geoff Daniels (157409)
Emile van den Akker (157417)
Ashley M. Toye (157419)

June 2012

Characterization of proteins fractionated by 2D-PAGE and identified by both the DeCyder software ...

Changes in levels of selected proteins encoded by SM biosynthetic genes in F. fujikuroi as determined by comparative (−N/+N) quantitative proteomics.

Philipp Wiemann (161902)
Christian M. K. Sieber (427430)
Katharina W. von Bargen (161922)
Lena Studt (105694)
Eva-Maria Niehaus (161916)
Jose J. Espino (427431)
Kathleen Huß (427432)
Caroline B. Michielse (257999)
Sabine Albermann (161910)
Dominik Wagner (427433)
Sonja V. Bergner (427434)
Lanelle R. Connolly (427435)
Andreas Fischer (22288)
Gunter Reuter (22292)
Karin Kleigrewe (427436)
Till Bald (427437)
Brenda D. Wingfield (190275)
Ron Ophir (128469)
Stanley Freeman (427438)
Michael Hippler (94480)
Kristina M. Smith (250856)
Daren W. Brown (427439)
Robert H. Proctor (427440)
Martin Münsterkötter (13742)
Michael Freitag (50158)
Hans-Ulrich Humpf (161934)
Ulrich Güldener (13741)
Bettina Tudzynski (105716)

June 2013

A: Increased (blue) and decreased (yellow) protein levels in response to nitrogen availabi...

A proteomic comparison was made between SVZ and HPC cultures.

Wayne Murrell (445723)
Emily Palmero (445724)
John Bianco (445725)
Biljana Stangeland (445726)
Mrinal Joel (445727)
Linda Paulson (445728)
Bernd Thiede (169487)
Zanina Grieg (445729)
Ingunn Ramsnes (445730)
Håvard K. Skjellegrind (445731)
Ståle Nygård (193891)
Petter Brandal (445732)
Cecilie Sandberg (445733)
Einar Vik-Mo (445734)
Sheryl Palmero (445735)
Iver A. Langmoen (445736)

August 2013

A proteomic comparison was made between SVZ and HPC cultures for differentially expressed protein...

Proteins in mPanc96 cells identified by mass spectrometry whose rate of syntheses increase when cultured on soft gels.

Robert W. Tilghman (164536)
Edik M. Blais (164542)
Catharine R. Cowan (164549)
Nicholas E. Sherman (164556)
Pablo R. Grigera (164564)
Erin D. Jeffery (164571)
Jay W. Fox (164576)
Brett R. Blackman (164584)
Daniel J. Tschumperlin (164589)
Jason A. Papin (164596)
J. Thomas Parsons (164603)

May 2012

The table lists proteins that exhibited lower heavy/light ratios (and therefore, higher net synth...

Proteins in A549 cells identified by mass spectrometry whose syntheses are least sensitive to changes in rigidity.

Robert W. Tilghman (164536)
Edik M. Blais (164542)
Catharine R. Cowan (164549)
Nicholas E. Sherman (164556)
Pablo R. Grigera (164564)
Erin D. Jeffery (164571)
Jay W. Fox (164576)
Brett R. Blackman (164584)
Daniel J. Tschumperlin (164589)
Jason A. Papin (164596)
J. Thomas Parsons (164603)

May 2012

The table lists proteins that exhibited lower heavy/light ratios (and therefore, higher net synth...

Proteins in A549 cells identified by mass spectrometry whose syntheses are most sensitive to changes in rigidity.

Robert W. Tilghman (164536)
Edik M. Blais (164542)
Catharine R. Cowan (164549)
Nicholas E. Sherman (164556)
Pablo R. Grigera (164564)
Erin D. Jeffery (164571)
Jay W. Fox (164576)
Brett R. Blackman (164584)
Daniel J. Tschumperlin (164589)
Jason A. Papin (164596)
J. Thomas Parsons (164603)

May 2012

The table lists proteins that exhibited higher heavy/light ratios (and therefore, lower synthesis...

Protein synthesis is decreased in rigidity-dependent cells cultured on soft gels.

Robert W. Tilghman (164536)
Edik M. Blais (164542)
Catharine R. Cowan (164549)
Nicholas E. Sherman (164556)
Pablo R. Grigera (164564)
Erin D. Jeffery (164571)
Jay W. Fox (164576)
Brett R. Blackman (164584)
Daniel J. Tschumperlin (164589)
Jason A. Papin (164596)
J. Thomas Parsons (164603)

May 2012

A549 cells were subjected to SILAC analysis to determine rates of protein synthesis on soft or st...

Identification of proteins that are differentially regulated by rigidity.

Robert W. Tilghman (164536)
Edik M. Blais (164542)
Catharine R. Cowan (164549)
Nicholas E. Sherman (164556)
Pablo R. Grigera (164564)
Erin D. Jeffery (164571)
Jay W. Fox (164576)
Brett R. Blackman (164584)
Daniel J. Tschumperlin (164589)
Jason A. Papin (164596)
J. Thomas Parsons (164603)

May 2012

H/L ratios of proteins identified in both stiff and soft samples plotted against each other for A...

Matrix Rigidity Regulates Cancer Cell Growth by Modulating Cellular Metabolism and Protein Synthesis

Tilghman Robert W.
Blais Edik M.
Cowan Catharine R.
Sherman Nicholas E.
Grigera Pablo R.
Jeffery Erin D.
Fox Jay W.
Blackman Brett R.
Tschumperlin Daniel J.
Papin Jason A.
Parsons J. Thomas

May 2012

encounter diverse types of microenvironments both at the site of the primary tumor and at sites of ...

Matrix rigidity regulates cancer cell growth by modulating cellular metabolism and protein synthesis.

Robert W Tilghman
Edik M Blais
Catharine R Cowan
Nicholas E Sherman
Pablo R Grigera
Erin D Jeffery
Jay W Fox
Brett R Blackman
Daniel J Tschumperlin
Jason A Papin
J Thomas Parsons

Tumor cells in vivo encounter diverse types of microenvironments both at the site of the primary tum...

Cell cycle-regulated proteins from G1 to S and S to G2 detected by mass spectrometry.

Karen R. Lane (387269)
Yanbao Yu (387270)
Patrick E. Lackey (387271)
Xian Chen (107385)
William F. Marzluff (387272)
Jeanette Gowen Cook (387273)

March 2013

A) Comparison of the total number of proteins detected in this study (2,842 proteins) to two othe...

A proteomic method for the analysis of changes in protein concentrations in response to systemic perturbations using metabolic incorporation of stable isotopes and mass spectrometry

Gustavsson, Niklas
Greber, Boris
Kreitler, Thomas
Himmelbauer, Heinz
Lehrach, Hans
Gobom, Johan

January 2005

While several techniques exist for assessing quantitative differences among proteomes representing d...

Differential protein expression in mouse granulosa cell and GCT cell culture media.

Marie-Noëlle Laguë (312969)
Raphaëlle Romieu-Mourez (312970)
Éric Bonneil (226014)
Alexandre Boyer (11861)
Nicolas Pouletty (312971)
Anne-Marie Mes-Masson (36417)
Pierre Thibault (226015)
Marie-Ève Nadeau (312972)
Derek Boerboom (188176)

February 2013

Samples were separated by 10% SDS-PAGE followed by silver staining. Arrows indicate examples of p...

Relative abundance of several types of collagens in whole cell lysates analyzed by Mass Spectrometry a.

Ritesh Kumar (145044)
John Culver Taylor (9947033)
Antrix Jain (5921750)
Sung Yun Jung (63319)
Victor Garza (13899840)
Yi Xu (131145)

October 2022

a HT29 cells were cultured in the presence or absence of Sgg strain TX20005 for 24 hours (3 biologic...

Proteins identified via proteome analysis exhibiting an increased spot volume during cultivation of V. paradoxus TBEA6 with 3,3´-thiodipropionic acid (TDP) or 3-sulfinopropionic acid (3SP) in comparison to gluconate (Gluc).

Viktoria Heine (3878644)
Christina Meinert-Berning (6321155)
Janina Lück (6321158)
Nadine Mikowsky (6321161)
Birgit Voigt (174853)
Katharina Riedel (444866)
Alexander Steinbüchel (558779)

February 2019

The table includes the spot numbers in the 2D gels (S1–S3 Figs), the protein function and the locus ...

Proteins with altered abundance in SDL (all gels, change in average ratio between 1.3 and 2, with a t-test of p<0.05).

Stéphanie Pellegrin (157375)
Kate J. Heesom (157385)
Timothy J. Satchwell (157395)
Bethan R. Hawley (157404)
Geoff Daniels (157409)
Emile van den Akker (157417)
Ashley M. Toye (157419)

June 2012

Characterization of proteins fractionated by 2D-PAGE and identified by both the DeCyder software ...

Changes in levels of selected proteins encoded by SM biosynthetic genes in F. fujikuroi as determined by comparative (−N/+N) quantitative proteomics.

Philipp Wiemann (161902)
Christian M. K. Sieber (427430)
Katharina W. von Bargen (161922)
Lena Studt (105694)
Eva-Maria Niehaus (161916)
Jose J. Espino (427431)
Kathleen Huß (427432)
Caroline B. Michielse (257999)
Sabine Albermann (161910)
Dominik Wagner (427433)
Sonja V. Bergner (427434)
Lanelle R. Connolly (427435)
Andreas Fischer (22288)
Gunter Reuter (22292)
Karin Kleigrewe (427436)
Till Bald (427437)
Brenda D. Wingfield (190275)
Ron Ophir (128469)
Stanley Freeman (427438)
Michael Hippler (94480)
Kristina M. Smith (250856)
Daren W. Brown (427439)
Robert H. Proctor (427440)
Martin Münsterkötter (13742)
Michael Freitag (50158)
Hans-Ulrich Humpf (161934)
Ulrich Güldener (13741)
Bettina Tudzynski (105716)

June 2013

A: Increased (blue) and decreased (yellow) protein levels in response to nitrogen availabi...

A proteomic comparison was made between SVZ and HPC cultures.

Wayne Murrell (445723)
Emily Palmero (445724)
John Bianco (445725)
Biljana Stangeland (445726)
Mrinal Joel (445727)
Linda Paulson (445728)
Bernd Thiede (169487)
Zanina Grieg (445729)
Ingunn Ramsnes (445730)
Håvard K. Skjellegrind (445731)
Ståle Nygård (193891)
Petter Brandal (445732)
Cecilie Sandberg (445733)
Einar Vik-Mo (445734)
Sheryl Palmero (445735)
Iver A. Langmoen (445736)

August 2013

A proteomic comparison was made between SVZ and HPC cultures for differentially expressed protein...

Proteins in mPanc96 cells identified by mass spectrometry whose rate of syntheses increase when cultured on soft gels.

Robert W. Tilghman (164536)
Edik M. Blais (164542)
Catharine R. Cowan (164549)
Nicholas E. Sherman (164556)
Pablo R. Grigera (164564)
Erin D. Jeffery (164571)
Jay W. Fox (164576)
Brett R. Blackman (164584)
Daniel J. Tschumperlin (164589)
Jason A. Papin (164596)
J. Thomas Parsons (164603)

May 2012

The table lists proteins that exhibited lower heavy/light ratios (and therefore, higher net synth...

Proteins in A549 cells identified by mass spectrometry whose syntheses are least sensitive to changes in rigidity.

Robert W. Tilghman (164536)
Edik M. Blais (164542)
Catharine R. Cowan (164549)
Nicholas E. Sherman (164556)
Pablo R. Grigera (164564)
Erin D. Jeffery (164571)
Jay W. Fox (164576)
Brett R. Blackman (164584)
Daniel J. Tschumperlin (164589)
Jason A. Papin (164596)
J. Thomas Parsons (164603)

May 2012

The table lists proteins that exhibited lower heavy/light ratios (and therefore, higher net synth...

Proteins in A549 cells identified by mass spectrometry whose syntheses are most sensitive to changes in rigidity.

Robert W. Tilghman (164536)
Edik M. Blais (164542)
Catharine R. Cowan (164549)
Nicholas E. Sherman (164556)
Pablo R. Grigera (164564)
Erin D. Jeffery (164571)
Jay W. Fox (164576)
Brett R. Blackman (164584)
Daniel J. Tschumperlin (164589)
Jason A. Papin (164596)
J. Thomas Parsons (164603)

May 2012

The table lists proteins that exhibited higher heavy/light ratios (and therefore, lower synthesis...

Protein synthesis is decreased in rigidity-dependent cells cultured on soft gels.

Robert W. Tilghman (164536)
Edik M. Blais (164542)
Catharine R. Cowan (164549)
Nicholas E. Sherman (164556)
Pablo R. Grigera (164564)
Erin D. Jeffery (164571)
Jay W. Fox (164576)
Brett R. Blackman (164584)
Daniel J. Tschumperlin (164589)
Jason A. Papin (164596)
J. Thomas Parsons (164603)

May 2012

A549 cells were subjected to SILAC analysis to determine rates of protein synthesis on soft or st...

Identification of proteins that are differentially regulated by rigidity.

Robert W. Tilghman (164536)
Edik M. Blais (164542)
Catharine R. Cowan (164549)
Nicholas E. Sherman (164556)
Pablo R. Grigera (164564)
Erin D. Jeffery (164571)
Jay W. Fox (164576)
Brett R. Blackman (164584)
Daniel J. Tschumperlin (164589)
Jason A. Papin (164596)
J. Thomas Parsons (164603)

May 2012

H/L ratios of proteins identified in both stiff and soft samples plotted against each other for A...

Matrix Rigidity Regulates Cancer Cell Growth by Modulating Cellular Metabolism and Protein Synthesis

Tilghman Robert W.
Blais Edik M.
Cowan Catharine R.
Sherman Nicholas E.
Grigera Pablo R.
Jeffery Erin D.
Fox Jay W.
Blackman Brett R.
Tschumperlin Daniel J.
Papin Jason A.
Parsons J. Thomas

May 2012

encounter diverse types of microenvironments both at the site of the primary tumor and at sites of ...

Matrix rigidity regulates cancer cell growth by modulating cellular metabolism and protein synthesis.

Robert W Tilghman
Edik M Blais
Catharine R Cowan
Nicholas E Sherman
Pablo R Grigera
Erin D Jeffery
Jay W Fox
Brett R Blackman
Daniel J Tschumperlin
Jason A Papin
J Thomas Parsons

Tumor cells in vivo encounter diverse types of microenvironments both at the site of the primary tum...

Cell cycle-regulated proteins from G1 to S and S to G2 detected by mass spectrometry.

Karen R. Lane (387269)
Yanbao Yu (387270)
Patrick E. Lackey (387271)
Xian Chen (107385)
William F. Marzluff (387272)
Jeanette Gowen Cook (387273)

March 2013

A) Comparison of the total number of proteins detected in this study (2,842 proteins) to two othe...

A proteomic method for the analysis of changes in protein concentrations in response to systemic perturbations using metabolic incorporation of stable isotopes and mass spectrometry

Gustavsson, Niklas
Greber, Boris
Kreitler, Thomas
Himmelbauer, Heinz
Lehrach, Hans
Gobom, Johan

January 2005

While several techniques exist for assessing quantitative differences among proteomes representing d...

Differential protein expression in mouse granulosa cell and GCT cell culture media.

Marie-Noëlle Laguë (312969)
Raphaëlle Romieu-Mourez (312970)
Éric Bonneil (226014)
Alexandre Boyer (11861)
Nicolas Pouletty (312971)
Anne-Marie Mes-Masson (36417)
Pierre Thibault (226015)
Marie-Ève Nadeau (312972)
Derek Boerboom (188176)

February 2013

Samples were separated by 10% SDS-PAGE followed by silver staining. Arrows indicate examples of p...

Relative abundance of several types of collagens in whole cell lysates analyzed by Mass Spectrometry a.

Ritesh Kumar (145044)
John Culver Taylor (9947033)
Antrix Jain (5921750)
Sung Yun Jung (63319)
Victor Garza (13899840)
Yi Xu (131145)

October 2022

a HT29 cells were cultured in the presence or absence of Sgg strain TX20005 for 24 hours (3 biologic...

Proteins identified via proteome analysis exhibiting an increased spot volume during cultivation of V. paradoxus TBEA6 with 3,3´-thiodipropionic acid (TDP) or 3-sulfinopropionic acid (3SP) in comparison to gluconate (Gluc).

Viktoria Heine (3878644)
Christina Meinert-Berning (6321155)
Janina Lück (6321158)
Nadine Mikowsky (6321161)
Birgit Voigt (174853)
Katharina Riedel (444866)
Alexander Steinbüchel (558779)

February 2019

The table includes the spot numbers in the 2D gels (S1–S3 Figs), the protein function and the locus ...

Proteins with altered abundance in SDL (all gels, change in average ratio between 1.3 and 2, with a t-test of p<0.05).

Stéphanie Pellegrin (157375)
Kate J. Heesom (157385)
Timothy J. Satchwell (157395)
Bethan R. Hawley (157404)
Geoff Daniels (157409)
Emile van den Akker (157417)
Ashley M. Toye (157419)

June 2012

Characterization of proteins fractionated by 2D-PAGE and identified by both the DeCyder software ...

Changes in levels of selected proteins encoded by SM biosynthetic genes in F. fujikuroi as determined by comparative (−N/+N) quantitative proteomics.

Philipp Wiemann (161902)
Christian M. K. Sieber (427430)
Katharina W. von Bargen (161922)
Lena Studt (105694)
Eva-Maria Niehaus (161916)
Jose J. Espino (427431)
Kathleen Huß (427432)
Caroline B. Michielse (257999)
Sabine Albermann (161910)
Dominik Wagner (427433)
Sonja V. Bergner (427434)
Lanelle R. Connolly (427435)
Andreas Fischer (22288)
Gunter Reuter (22292)
Karin Kleigrewe (427436)
Till Bald (427437)
Brenda D. Wingfield (190275)
Ron Ophir (128469)
Stanley Freeman (427438)
Michael Hippler (94480)
Kristina M. Smith (250856)
Daren W. Brown (427439)
Robert H. Proctor (427440)
Martin Münsterkötter (13742)
Michael Freitag (50158)
Hans-Ulrich Humpf (161934)
Ulrich Güldener (13741)
Bettina Tudzynski (105716)

June 2013

A: Increased (blue) and decreased (yellow) protein levels in response to nitrogen availabi...

A proteomic comparison was made between SVZ and HPC cultures.

Wayne Murrell (445723)
Emily Palmero (445724)
John Bianco (445725)
Biljana Stangeland (445726)
Mrinal Joel (445727)
Linda Paulson (445728)
Bernd Thiede (169487)
Zanina Grieg (445729)
Ingunn Ramsnes (445730)
Håvard K. Skjellegrind (445731)
Ståle Nygård (193891)
Petter Brandal (445732)
Cecilie Sandberg (445733)
Einar Vik-Mo (445734)
Sheryl Palmero (445735)
Iver A. Langmoen (445736)

August 2013

A proteomic comparison was made between SVZ and HPC cultures for differentially expressed protein...

Proteins in mPanc96 cells identified by mass spectrometry whose rates of syntheses decrease when cultured on soft gels.

Abstract

Extracted data

Proteins in mPanc96 cells identified by mass spectrometry whose rates of syntheses decrease when cultured on soft gels.

Abstract

Extracted data

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