Proteins in mPanc96 cells identified by mass spectrometry whose rate of syntheses increase when cultured on soft gels.

Proteins with altered abundance in SDL with a change in average ratio of >2 and a t-test of p<0.05.

Stéphanie Pellegrin (157375)
Kate J. Heesom (157385)
Timothy J. Satchwell (157395)
Bethan R. Hawley (157404)
Geoff Daniels (157409)
Emile van den Akker (157417)
Ashley M. Toye (157419)

June 2012

Characterization of proteins fractionated by 2D-PAGE and identified by both the DeCyder software ...

Relative abundance of several types of collagens in whole cell lysates analyzed by Mass Spectrometry a.

Ritesh Kumar (145044)
John Culver Taylor (9947033)
Antrix Jain (5921750)
Sung Yun Jung (63319)
Victor Garza (13899840)
Yi Xu (131145)

October 2022

a HT29 cells were cultured in the presence or absence of Sgg strain TX20005 for 24 hours (3 biologic...

A proteomic method for the analysis of changes in protein concentrations in response to systemic perturbations using metabolic incorporation of stable isotopes and mass spectrometry

Gustavsson, Niklas
Greber, Boris
Kreitler, Thomas
Himmelbauer, Heinz
Lehrach, Hans
Gobom, Johan

January 2005

While several techniques exist for assessing quantitative differences among proteomes representing d...

Proteins in mPanc96 cells identified by mass spectrometry whose rates of syntheses decrease when cultured on soft gels.

Robert W. Tilghman (164536)
Edik M. Blais (164542)
Catharine R. Cowan (164549)
Nicholas E. Sherman (164556)
Pablo R. Grigera (164564)
Erin D. Jeffery (164571)
Jay W. Fox (164576)
Brett R. Blackman (164584)
Daniel J. Tschumperlin (164589)
Jason A. Papin (164596)
J. Thomas Parsons (164603)

May 2012

The table lists proteins that exhibited higher heavy/light ratios (and therefore, lower synthesis...

Proteins in A549 cells identified by mass spectrometry whose syntheses are least sensitive to changes in rigidity.

Robert W. Tilghman (164536)
Edik M. Blais (164542)
Catharine R. Cowan (164549)
Nicholas E. Sherman (164556)
Pablo R. Grigera (164564)
Erin D. Jeffery (164571)
Jay W. Fox (164576)
Brett R. Blackman (164584)
Daniel J. Tschumperlin (164589)
Jason A. Papin (164596)
J. Thomas Parsons (164603)

May 2012

The table lists proteins that exhibited lower heavy/light ratios (and therefore, higher net synth...

Proteins in A549 cells identified by mass spectrometry whose syntheses are most sensitive to changes in rigidity.

Robert W. Tilghman (164536)
Edik M. Blais (164542)
Catharine R. Cowan (164549)
Nicholas E. Sherman (164556)
Pablo R. Grigera (164564)
Erin D. Jeffery (164571)
Jay W. Fox (164576)
Brett R. Blackman (164584)
Daniel J. Tschumperlin (164589)
Jason A. Papin (164596)
J. Thomas Parsons (164603)

May 2012

The table lists proteins that exhibited higher heavy/light ratios (and therefore, lower synthesis...

Protein synthesis is decreased in rigidity-dependent cells cultured on soft gels.

Robert W. Tilghman (164536)
Edik M. Blais (164542)
Catharine R. Cowan (164549)
Nicholas E. Sherman (164556)
Pablo R. Grigera (164564)
Erin D. Jeffery (164571)
Jay W. Fox (164576)
Brett R. Blackman (164584)
Daniel J. Tschumperlin (164589)
Jason A. Papin (164596)
J. Thomas Parsons (164603)

May 2012

A549 cells were subjected to SILAC analysis to determine rates of protein synthesis on soft or st...

Identification of proteins that are differentially regulated by rigidity.

Robert W. Tilghman (164536)
Edik M. Blais (164542)
Catharine R. Cowan (164549)
Nicholas E. Sherman (164556)
Pablo R. Grigera (164564)
Erin D. Jeffery (164571)
Jay W. Fox (164576)
Brett R. Blackman (164584)
Daniel J. Tschumperlin (164589)
Jason A. Papin (164596)
J. Thomas Parsons (164603)

May 2012

H/L ratios of proteins identified in both stiff and soft samples plotted against each other for A...

Matrix Rigidity Regulates Cancer Cell Growth by Modulating Cellular Metabolism and Protein Synthesis

Tilghman Robert W.
Blais Edik M.
Cowan Catharine R.
Sherman Nicholas E.
Grigera Pablo R.
Jeffery Erin D.
Fox Jay W.
Blackman Brett R.
Tschumperlin Daniel J.
Papin Jason A.
Parsons J. Thomas

May 2012

encounter diverse types of microenvironments both at the site of the primary tumor and at sites of ...

Matrix rigidity regulates cancer cell growth by modulating cellular metabolism and protein synthesis.

Robert W Tilghman
Edik M Blais
Catharine R Cowan
Nicholas E Sherman
Pablo R Grigera
Erin D Jeffery
Jay W Fox
Brett R Blackman
Daniel J Tschumperlin
Jason A Papin
J Thomas Parsons

Tumor cells in vivo encounter diverse types of microenvironments both at the site of the primary tum...

Proteins identified via proteome analysis exhibiting an increased spot volume during cultivation of V. paradoxus TBEA6 with 3,3´-thiodipropionic acid (TDP) or 3-sulfinopropionic acid (3SP) in comparison to gluconate (Gluc).

Viktoria Heine (3878644)
Christina Meinert-Berning (6321155)
Janina Lück (6321158)
Nadine Mikowsky (6321161)
Birgit Voigt (174853)
Katharina Riedel (444866)
Alexander Steinbüchel (558779)

February 2019

The table includes the spot numbers in the 2D gels (S1–S3 Figs), the protein function and the locus ...

Cell cycle-regulated proteins from G1 to S and S to G2 detected by mass spectrometry.

Karen R. Lane (387269)
Yanbao Yu (387270)
Patrick E. Lackey (387271)
Xian Chen (107385)
William F. Marzluff (387272)
Jeanette Gowen Cook (387273)

March 2013

A) Comparison of the total number of proteins detected in this study (2,842 proteins) to two othe...

Proteins with altered abundance in SDL (all gels, change in average ratio between 1.3 and 2, with a t-test of p<0.05).

Stéphanie Pellegrin (157375)
Kate J. Heesom (157385)
Timothy J. Satchwell (157395)
Bethan R. Hawley (157404)
Geoff Daniels (157409)
Emile van den Akker (157417)
Ashley M. Toye (157419)

June 2012

Characterization of proteins fractionated by 2D-PAGE and identified by both the DeCyder software ...

Cellular/extracellular level of individual SUN proteins during growth of liquid cell cultures in GM medium. A

Evgeny Kuznetsov (457347)
Helena Kučerová (457348)
Libuše Váchová (176465)
Zdena Palková (176473)

September 2013

, Protein amounts in cell lysates (CELL) and in extracellular extracts (EXTRA), respectively, pre...

Previously identified DNA synthesome proteins or protein subunits identified by mass spectrometry from BN gel with a relative electrophoretic mobility of 0.8–1 MDa.

Caroline M. Li (3609314)
Yunan Miao (3609308)
Robert G. Lingeman (3609311)
Robert J. Hickey (550809)
Linda H. Malkas (550813)

December 2016

Previously identified DNA synthesome proteins or protein subunits identified by mass spectrometry...

Proteins with altered abundance in SDL with a change in average ratio of >2 and a t-test of p<0.05.

Stéphanie Pellegrin (157375)
Kate J. Heesom (157385)
Timothy J. Satchwell (157395)
Bethan R. Hawley (157404)
Geoff Daniels (157409)
Emile van den Akker (157417)
Ashley M. Toye (157419)

June 2012

Characterization of proteins fractionated by 2D-PAGE and identified by both the DeCyder software ...

Relative abundance of several types of collagens in whole cell lysates analyzed by Mass Spectrometry a.

Ritesh Kumar (145044)
John Culver Taylor (9947033)
Antrix Jain (5921750)
Sung Yun Jung (63319)
Victor Garza (13899840)
Yi Xu (131145)

October 2022

a HT29 cells were cultured in the presence or absence of Sgg strain TX20005 for 24 hours (3 biologic...

A proteomic method for the analysis of changes in protein concentrations in response to systemic perturbations using metabolic incorporation of stable isotopes and mass spectrometry

Gustavsson, Niklas
Greber, Boris
Kreitler, Thomas
Himmelbauer, Heinz
Lehrach, Hans
Gobom, Johan

January 2005

While several techniques exist for assessing quantitative differences among proteomes representing d...

Proteins in mPanc96 cells identified by mass spectrometry whose rates of syntheses decrease when cultured on soft gels.

Robert W. Tilghman (164536)
Edik M. Blais (164542)
Catharine R. Cowan (164549)
Nicholas E. Sherman (164556)
Pablo R. Grigera (164564)
Erin D. Jeffery (164571)
Jay W. Fox (164576)
Brett R. Blackman (164584)
Daniel J. Tschumperlin (164589)
Jason A. Papin (164596)
J. Thomas Parsons (164603)

May 2012

The table lists proteins that exhibited higher heavy/light ratios (and therefore, lower synthesis...

Proteins in A549 cells identified by mass spectrometry whose syntheses are least sensitive to changes in rigidity.

Robert W. Tilghman (164536)
Edik M. Blais (164542)
Catharine R. Cowan (164549)
Nicholas E. Sherman (164556)
Pablo R. Grigera (164564)
Erin D. Jeffery (164571)
Jay W. Fox (164576)
Brett R. Blackman (164584)
Daniel J. Tschumperlin (164589)
Jason A. Papin (164596)
J. Thomas Parsons (164603)

May 2012

The table lists proteins that exhibited lower heavy/light ratios (and therefore, higher net synth...

Proteins in A549 cells identified by mass spectrometry whose syntheses are most sensitive to changes in rigidity.

Robert W. Tilghman (164536)
Edik M. Blais (164542)
Catharine R. Cowan (164549)
Nicholas E. Sherman (164556)
Pablo R. Grigera (164564)
Erin D. Jeffery (164571)
Jay W. Fox (164576)
Brett R. Blackman (164584)
Daniel J. Tschumperlin (164589)
Jason A. Papin (164596)
J. Thomas Parsons (164603)

May 2012

The table lists proteins that exhibited higher heavy/light ratios (and therefore, lower synthesis...

Protein synthesis is decreased in rigidity-dependent cells cultured on soft gels.

Robert W. Tilghman (164536)
Edik M. Blais (164542)
Catharine R. Cowan (164549)
Nicholas E. Sherman (164556)
Pablo R. Grigera (164564)
Erin D. Jeffery (164571)
Jay W. Fox (164576)
Brett R. Blackman (164584)
Daniel J. Tschumperlin (164589)
Jason A. Papin (164596)
J. Thomas Parsons (164603)

May 2012

A549 cells were subjected to SILAC analysis to determine rates of protein synthesis on soft or st...

Identification of proteins that are differentially regulated by rigidity.

Robert W. Tilghman (164536)
Edik M. Blais (164542)
Catharine R. Cowan (164549)
Nicholas E. Sherman (164556)
Pablo R. Grigera (164564)
Erin D. Jeffery (164571)
Jay W. Fox (164576)
Brett R. Blackman (164584)
Daniel J. Tschumperlin (164589)
Jason A. Papin (164596)
J. Thomas Parsons (164603)

May 2012

H/L ratios of proteins identified in both stiff and soft samples plotted against each other for A...

Matrix Rigidity Regulates Cancer Cell Growth by Modulating Cellular Metabolism and Protein Synthesis

Tilghman Robert W.
Blais Edik M.
Cowan Catharine R.
Sherman Nicholas E.
Grigera Pablo R.
Jeffery Erin D.
Fox Jay W.
Blackman Brett R.
Tschumperlin Daniel J.
Papin Jason A.
Parsons J. Thomas

May 2012

encounter diverse types of microenvironments both at the site of the primary tumor and at sites of ...

Matrix rigidity regulates cancer cell growth by modulating cellular metabolism and protein synthesis.

Robert W Tilghman
Edik M Blais
Catharine R Cowan
Nicholas E Sherman
Pablo R Grigera
Erin D Jeffery
Jay W Fox
Brett R Blackman
Daniel J Tschumperlin
Jason A Papin
J Thomas Parsons

Tumor cells in vivo encounter diverse types of microenvironments both at the site of the primary tum...

Proteins identified via proteome analysis exhibiting an increased spot volume during cultivation of V. paradoxus TBEA6 with 3,3´-thiodipropionic acid (TDP) or 3-sulfinopropionic acid (3SP) in comparison to gluconate (Gluc).

Viktoria Heine (3878644)
Christina Meinert-Berning (6321155)
Janina Lück (6321158)
Nadine Mikowsky (6321161)
Birgit Voigt (174853)
Katharina Riedel (444866)
Alexander Steinbüchel (558779)

February 2019

The table includes the spot numbers in the 2D gels (S1–S3 Figs), the protein function and the locus ...

Cell cycle-regulated proteins from G1 to S and S to G2 detected by mass spectrometry.

Karen R. Lane (387269)
Yanbao Yu (387270)
Patrick E. Lackey (387271)
Xian Chen (107385)
William F. Marzluff (387272)
Jeanette Gowen Cook (387273)

March 2013

A) Comparison of the total number of proteins detected in this study (2,842 proteins) to two othe...

Proteins with altered abundance in SDL (all gels, change in average ratio between 1.3 and 2, with a t-test of p<0.05).

Stéphanie Pellegrin (157375)
Kate J. Heesom (157385)
Timothy J. Satchwell (157395)
Bethan R. Hawley (157404)
Geoff Daniels (157409)
Emile van den Akker (157417)
Ashley M. Toye (157419)

June 2012

Characterization of proteins fractionated by 2D-PAGE and identified by both the DeCyder software ...

Cellular/extracellular level of individual SUN proteins during growth of liquid cell cultures in GM medium. A

Evgeny Kuznetsov (457347)
Helena Kučerová (457348)
Libuše Váchová (176465)
Zdena Palková (176473)

September 2013

, Protein amounts in cell lysates (CELL) and in extracellular extracts (EXTRA), respectively, pre...

Previously identified DNA synthesome proteins or protein subunits identified by mass spectrometry from BN gel with a relative electrophoretic mobility of 0.8–1 MDa.

Caroline M. Li (3609314)
Yunan Miao (3609308)
Robert G. Lingeman (3609311)
Robert J. Hickey (550809)
Linda H. Malkas (550813)

December 2016

Previously identified DNA synthesome proteins or protein subunits identified by mass spectrometry...

Proteins with altered abundance in SDL with a change in average ratio of >2 and a t-test of p<0.05.

Stéphanie Pellegrin (157375)
Kate J. Heesom (157385)
Timothy J. Satchwell (157395)
Bethan R. Hawley (157404)
Geoff Daniels (157409)
Emile van den Akker (157417)
Ashley M. Toye (157419)

June 2012

Characterization of proteins fractionated by 2D-PAGE and identified by both the DeCyder software ...

Relative abundance of several types of collagens in whole cell lysates analyzed by Mass Spectrometry a.

Ritesh Kumar (145044)
John Culver Taylor (9947033)
Antrix Jain (5921750)
Sung Yun Jung (63319)
Victor Garza (13899840)
Yi Xu (131145)

October 2022

a HT29 cells were cultured in the presence or absence of Sgg strain TX20005 for 24 hours (3 biologic...

A proteomic method for the analysis of changes in protein concentrations in response to systemic perturbations using metabolic incorporation of stable isotopes and mass spectrometry

Gustavsson, Niklas
Greber, Boris
Kreitler, Thomas
Himmelbauer, Heinz
Lehrach, Hans
Gobom, Johan

January 2005

While several techniques exist for assessing quantitative differences among proteomes representing d...

Proteins in mPanc96 cells identified by mass spectrometry whose rate of syntheses increase when cultured on soft gels.

Abstract

Extracted data

Proteins in mPanc96 cells identified by mass spectrometry whose rate of syntheses increase when cultured on soft gels.

Abstract

Extracted data

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