<p>SSU and LSU rDNA reads, and protein coding DNA reads from metagenomic dataset as well as those reads from metatranscriptomic datasets identified as SSU rRNA, LSU rRNA, and mRNA. Only taxonomic groups that represented >1% of total reads in at least one dataset were included.</p
Background: Computational analysis of metagenomes requires the taxonomical assignment of the genome ...
Next-generation sequencing technologies allow 16S ribosomal RNA gene surveys or whole metagenome sho...
Shotgun Metagenomics has emerged as a popular approach for understanding the underlying microbial co...
<p>Results showed that bacteria have much lower community expression efficiency of protein coding ge...
<p>Cecal bacterial community compositions of individual samples. Each row represents the cecal bacte...
<p>Unassembled reads annotated on MG-RAST were analyzed using the classification tool based on RDP (...
MotivationNext-generation sequencing coupled with metagenomics has led to the rapid growth of sequen...
The predicted proteins encoded in DNA isolated from environmental microbial community samples revea...
Next-generation sequencing has dramatically changed the landscape of microbial ecology, large-scale ...
human microbiota and analysis of its role in human health and disease. • DATSETS: i) reference genom...
<p>Taxonomic composition of bacterial communities at the genus level for the sequences retrieved fro...
138 p.Thesis (Ph.D.)--University of Illinois at Urbana-Champaign, 2008.This study details the evalua...
Ecological assessments are necessary to evaluate the status of our deteriorating ecosystems, however...
International audienceThe microbial taxonomic composition of the three domains of life in two coasta...
Profiling the taxonomic composition of microbial communities commonly involves the classification of...
Background: Computational analysis of metagenomes requires the taxonomical assignment of the genome ...
Next-generation sequencing technologies allow 16S ribosomal RNA gene surveys or whole metagenome sho...
Shotgun Metagenomics has emerged as a popular approach for understanding the underlying microbial co...
<p>Results showed that bacteria have much lower community expression efficiency of protein coding ge...
<p>Cecal bacterial community compositions of individual samples. Each row represents the cecal bacte...
<p>Unassembled reads annotated on MG-RAST were analyzed using the classification tool based on RDP (...
MotivationNext-generation sequencing coupled with metagenomics has led to the rapid growth of sequen...
The predicted proteins encoded in DNA isolated from environmental microbial community samples revea...
Next-generation sequencing has dramatically changed the landscape of microbial ecology, large-scale ...
human microbiota and analysis of its role in human health and disease. • DATSETS: i) reference genom...
<p>Taxonomic composition of bacterial communities at the genus level for the sequences retrieved fro...
138 p.Thesis (Ph.D.)--University of Illinois at Urbana-Champaign, 2008.This study details the evalua...
Ecological assessments are necessary to evaluate the status of our deteriorating ecosystems, however...
International audienceThe microbial taxonomic composition of the three domains of life in two coasta...
Profiling the taxonomic composition of microbial communities commonly involves the classification of...
Background: Computational analysis of metagenomes requires the taxonomical assignment of the genome ...
Next-generation sequencing technologies allow 16S ribosomal RNA gene surveys or whole metagenome sho...
Shotgun Metagenomics has emerged as a popular approach for understanding the underlying microbial co...