<p>Output from system (1)–(6) subject to discrete steps in signal level/perception computed using the Gillespie SSA. For comparison, the DegU levels predicted by the deterministic system with the response for the chosen values indicated by the red, blue, green and yellow dots, respectively, are shown in (A). Histograms show the levels of (B) DegU and (C) exoprotease collated from 1000 simulations at hours. All parameter values from <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0038574#pone-0038574-t001" target="_blank">Table 1</a> except for each simulation, was selected randomly from the values: (red); (blue); (green); (yellow). Initial levels set to correspond to the deterministic steady state associated wit...
<p>Noise in protein abundance derived from stochastic simulations with different TF numbers (solid-...
<p>(A) Fraction of time network adopts synchronous dynamics as a function of rewiring parameter for ...
It is well known that the kinetics of an intracellular biochemical network is stochastic. This is du...
<p>Output from system (1)–(6) subject to normally distributed signal level/perception computed using...
<p>Output from system (1)–(6) computed using the Gillespie SSA. For comparison, the DegU levels pred...
<p>Output from system (1)–(6) computed using the Gillespie SSA. Histograms show the levels of (A) De...
<p>Dotted lines are the average level of protein in the absence of any noise. Values used are <i>β</...
<p>Noise of the response of the biphasic amplitude filter as a function of the input gene protein l...
<p>Noise of the response of the biphasic amplitude filter as a function of the input gene protein l...
The intrinsic stochasticity of biomolecular systems is a well studied phe- nomenon. Less attention ...
Left column: 1D. Combined statistics from 100 simulations. The thick line is the mean value and the ...
<p>Noise in the period of the protein levels of genes B, C, and D (), for constant input . Different...
<p>(A) Excitatory networks (P<sub>e</sub> = 0.15); (B) excitatory and inhibitory networks (P<sub>e</...
Stochasticity is both exploited and controlled by cells. Although the intrinsic stochasticity inhere...
(A) Analytical solution for the cross-correlation between protein Y’s proteome fraction ϕY and growt...
<p>Noise in protein abundance derived from stochastic simulations with different TF numbers (solid-...
<p>(A) Fraction of time network adopts synchronous dynamics as a function of rewiring parameter for ...
It is well known that the kinetics of an intracellular biochemical network is stochastic. This is du...
<p>Output from system (1)–(6) subject to normally distributed signal level/perception computed using...
<p>Output from system (1)–(6) computed using the Gillespie SSA. For comparison, the DegU levels pred...
<p>Output from system (1)–(6) computed using the Gillespie SSA. Histograms show the levels of (A) De...
<p>Dotted lines are the average level of protein in the absence of any noise. Values used are <i>β</...
<p>Noise of the response of the biphasic amplitude filter as a function of the input gene protein l...
<p>Noise of the response of the biphasic amplitude filter as a function of the input gene protein l...
The intrinsic stochasticity of biomolecular systems is a well studied phe- nomenon. Less attention ...
Left column: 1D. Combined statistics from 100 simulations. The thick line is the mean value and the ...
<p>Noise in the period of the protein levels of genes B, C, and D (), for constant input . Different...
<p>(A) Excitatory networks (P<sub>e</sub> = 0.15); (B) excitatory and inhibitory networks (P<sub>e</...
Stochasticity is both exploited and controlled by cells. Although the intrinsic stochasticity inhere...
(A) Analytical solution for the cross-correlation between protein Y’s proteome fraction ϕY and growt...
<p>Noise in protein abundance derived from stochastic simulations with different TF numbers (solid-...
<p>(A) Fraction of time network adopts synchronous dynamics as a function of rewiring parameter for ...
It is well known that the kinetics of an intracellular biochemical network is stochastic. This is du...