<p>A phenotypic association regardless of species relationships is observed. Three major monophyletic clades (red, rays and no-red) are formed. Representative phenotypes of each clade are shown at the right (for full array of phenotypes and species see <a href="http://www.plosgenetics.org/article/info:doi/10.1371/journal.pgen.1002752#pgen-1002752-g001" target="_blank">Figure 1</a>). (i) <i>H. m. malleti</i>, (ii) <i>H. m. plesseni</i>, (iii) <i>H. t. timareta</i>, (iv) <i>H. c. cydnides</i>, (v) <i>H. c. weymeri</i> f. <i>gustavi</i>, (vi) <i>H. timareta</i> subsp. nov, (vii) <i>H. c. weymeri</i> f. <i>weymeri</i>, (viii) <i>H. c. chioneus</i>, (ix) <i>H. c. cordula</i>, (x) <i>H. c. zelinde</i>, (xi) <i>H. c. warningery</i>, (xii) <i>H. c....
<p>The numbers in each node represents bootstrap support and posterior probability values based on B...
<p>Phylogenetic relationships of haplotypes based on the 12S and 16S gene sequences, as determined b...
<p><b>A</b>) Phylogenetic tree based on the combined mitochondrial genes 16S and COI inferred by Bay...
<p>Top panel represents the order and gene content in the <i>HmB</i> red locus, with vertical lines ...
<p>Strict consensus of 3600 most parsimonious trees (L = 1205; CI = 0.59; RI = 0.93; all tree statis...
<p>Neighbour-Joining tree of mitochondrial COI haplotypes and alleles at the nuclear loci <i>GAPDH</...
<p>Bayesian consensus trees reconstructed from ND3 and domain I sequences showing posterior probabil...
<p>For clarity, five major clades are condensed into colored triangles on the tree (color as in Fig....
<p>Numbers above lines indicate bootstrap support values (branches without number received 50% suppo...
<p>Three clades were grouped. These contained the three subspecies of <i>Platysternon megacephalum</...
<p>Consensus phylogenetic tree of the species included in this study. Red species names and disconti...
Fig. 3. Summary of topologies and clade supports result of the phylogenetic analyses of the combined...
<p>(A) <i>P. piseki – P. gracilis</i> clade B, with sub-groups B1 and B2 as shown, (B) <i>P. piseki ...
<p>Phylogenies were estimated using 91 sequences of mitochondrial genes Cyt b (357 bp) and 16S (509 ...
<p>Sample codes refer to the data sets of Fritz et al. <a href="http://www.plosone.org/article/info:...
<p>The numbers in each node represents bootstrap support and posterior probability values based on B...
<p>Phylogenetic relationships of haplotypes based on the 12S and 16S gene sequences, as determined b...
<p><b>A</b>) Phylogenetic tree based on the combined mitochondrial genes 16S and COI inferred by Bay...
<p>Top panel represents the order and gene content in the <i>HmB</i> red locus, with vertical lines ...
<p>Strict consensus of 3600 most parsimonious trees (L = 1205; CI = 0.59; RI = 0.93; all tree statis...
<p>Neighbour-Joining tree of mitochondrial COI haplotypes and alleles at the nuclear loci <i>GAPDH</...
<p>Bayesian consensus trees reconstructed from ND3 and domain I sequences showing posterior probabil...
<p>For clarity, five major clades are condensed into colored triangles on the tree (color as in Fig....
<p>Numbers above lines indicate bootstrap support values (branches without number received 50% suppo...
<p>Three clades were grouped. These contained the three subspecies of <i>Platysternon megacephalum</...
<p>Consensus phylogenetic tree of the species included in this study. Red species names and disconti...
Fig. 3. Summary of topologies and clade supports result of the phylogenetic analyses of the combined...
<p>(A) <i>P. piseki – P. gracilis</i> clade B, with sub-groups B1 and B2 as shown, (B) <i>P. piseki ...
<p>Phylogenies were estimated using 91 sequences of mitochondrial genes Cyt b (357 bp) and 16S (509 ...
<p>Sample codes refer to the data sets of Fritz et al. <a href="http://www.plosone.org/article/info:...
<p>The numbers in each node represents bootstrap support and posterior probability values based on B...
<p>Phylogenetic relationships of haplotypes based on the 12S and 16S gene sequences, as determined b...
<p><b>A</b>) Phylogenetic tree based on the combined mitochondrial genes 16S and COI inferred by Bay...