Phylogenomic analyses of haloarchaea.

<p>(A) The MSSA supertree of haloarchaea and two outgroup genomes (Mhu and Mac). (B) The Neighbor-Joining phylogeny of haloarchaeal Baum-Ragan pseudo-sequences. The numbers mark the bootstrap values (>70%) of each branch out of 1000 bootstrap resamplings. (C) The phylogenetic Neighbor-Net network of Baum-Ragan pseudo-sequences. The genome size and GC content of each strain are shown in parentheses. Abbreviations: NJ7, <i>Natrinema</i> sp. J7-2; Hma, <i>Har. marismortui</i> ATCC 43049; Hal, <i>Hbt. salinarum</i> R1; Hsl, <i>Hbt. salinarum</i> NRC-1; Hmu, <i>Hmc. mukohataei</i> DSM 12286; Hwa, <i>Hqr. walsbyi</i> DSM 16790; Hut, <i>Hrd. utahensis</i> DSM 12940; Hla, <i>Hrr. lacusprofundi</i> ATCC 49239; Htu, <i>Htg. turkmenica</i> DSM 5511; Nph, <i>Nmn. pharaonis</i> DSM 2160; Hvo, <i>Hfx. volcanii</i> DS2; Hbo, <i>Hgm. borinquense</i> DSM 11551; Nma, <i>Nab. magadii</i> ATCC 43099; Hje, <i>Halalkalicoccus jeotgali</i> B3; Hxa, <i>Hpg. xanaduensis</i> SH-6; Mac, <i>Methanosarcina acetivorans</i> C2A; Mhu, <i>Methanospirillum hungatei</i> JF-1.