<p>A) Bootstrapped neighbor-joining tree (1000 bootstrap replicates). B) Bootstrapped phylogenetic maximum likelihood tree (100 bootstrap replicates). Species name abbreviations are applied as in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0041850#pone-0041850-g002" target="_blank">Figure 2</a>. The chromosome, scaffold (s-) or ultracontig (u-) assignments are given in the sequence names after the species abbreviations. Both trees are presented as radial unrooted trees since no invertebrate orthologs could be identified to be used as outgroup.</p
<p>The phylogenetic tree was constructed based on a JTT matrix with 1000 bootstrap replicates by MEG...
<p>A neighbor-joining tree using Poisson-correction distances was constructed with PG amino acid seq...
<p>(A) Predicted amino-acid sequence of the <i>P. lividus</i> CMPl, with Compass- and Homeo- domain ...
<p>Sequence names correspond to E3 protein sequences listed in <a href="http://www.plosone.org/artic...
The branch lengths are determined with ML analysis. The Strongylocentrotus purpuratus and Paracentro...
<p>The A) sequence alignments and B) neighbour-joining phylogenetic tree following 1,000 bootstraps ...
<p>Phylogenetic tree displaying the relationship of chlamydial TGMs to full length PPR-TGM proteins....
<p>The tree shown was generated by the neighbor-joining method of ClustalW, using an alignment of co...
<p>A phylogenetic tree of various metazoan RBM4 orthologs was created with the Clustal X program bas...
<p>The concatenated dataset comprising 278 amino acid sites of GAPDH, 280 amino acid sites of actin,...
<p>Representative clade members are annotated as follows: Clade 1: green; Clade 2a: red and Clade 2b...
<p>The phylogram was constructed with the MEGA 5.05 software using the neighbor-joining method based...
<p>The phylogenetic tree was constructed with the neighbour-joining algorithm in MEGA7.0. The bootst...
<p>Phylogenetic tree displaying the relationship of chlamydial TGMs to the TGM domain of PPR-TGM pro...
<p>This family includes all identified homologs of the known <i>AKAP2</i> genes. The <i>PDG</i> isof...
<p>The phylogenetic tree was constructed based on a JTT matrix with 1000 bootstrap replicates by MEG...
<p>A neighbor-joining tree using Poisson-correction distances was constructed with PG amino acid seq...
<p>(A) Predicted amino-acid sequence of the <i>P. lividus</i> CMPl, with Compass- and Homeo- domain ...
<p>Sequence names correspond to E3 protein sequences listed in <a href="http://www.plosone.org/artic...
The branch lengths are determined with ML analysis. The Strongylocentrotus purpuratus and Paracentro...
<p>The A) sequence alignments and B) neighbour-joining phylogenetic tree following 1,000 bootstraps ...
<p>Phylogenetic tree displaying the relationship of chlamydial TGMs to full length PPR-TGM proteins....
<p>The tree shown was generated by the neighbor-joining method of ClustalW, using an alignment of co...
<p>A phylogenetic tree of various metazoan RBM4 orthologs was created with the Clustal X program bas...
<p>The concatenated dataset comprising 278 amino acid sites of GAPDH, 280 amino acid sites of actin,...
<p>Representative clade members are annotated as follows: Clade 1: green; Clade 2a: red and Clade 2b...
<p>The phylogram was constructed with the MEGA 5.05 software using the neighbor-joining method based...
<p>The phylogenetic tree was constructed with the neighbour-joining algorithm in MEGA7.0. The bootst...
<p>Phylogenetic tree displaying the relationship of chlamydial TGMs to the TGM domain of PPR-TGM pro...
<p>This family includes all identified homologs of the known <i>AKAP2</i> genes. The <i>PDG</i> isof...
<p>The phylogenetic tree was constructed based on a JTT matrix with 1000 bootstrap replicates by MEG...
<p>A neighbor-joining tree using Poisson-correction distances was constructed with PG amino acid seq...
<p>(A) Predicted amino-acid sequence of the <i>P. lividus</i> CMPl, with Compass- and Homeo- domain ...