The MOCAT data processing pipeline.
- Jens Roat Kultima (125991)
- Shinichi Sunagawa (125995)
- Junhua Li (125998)
- Weineng Chen (126001)
- Hua Chen (43790)
- Daniel R. Mende (126004)
- Manimozhiyan Arumugam (126007)
- Qi Pan (126009)
- Binghang Liu (126011)
- Junjie Qin (126012)
- Jun Wang (5906)
- Peer Bork (438)
Publication date
October 2012
DOIAbstract
<p>Metagenomic samples are collected and sequenced. The raw sequence reads are given as input to the pipeline, which are processed by modular steps resulting in metagenome assemblies and predicted genes. Arrows extending to the right from boxes, indicate input to various downstream analyses. Statistics from each step are summarized into multi-sheet Excel documents, as well as queryable SQLite databases.</p
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