<p>HEK293 cells transfected with pool of plasmids (listed in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0050521#pone.0050521.s003" target="_blank">Table S2</a> and pRL-SV40) and were subsequently treated with chemicals of interest. Values are presented as log2 treatments of the fold induction of the TFBS-directed UR expression after treatment with the inducer of interest. The errors are calculated as 1 standard error of the mean each way. P-values indicate the posterior probability that there was no difference in expression levels between the control and treatment samples so a lower p-value would indicate a greater likelihood that there was a difference between the control and treatment samples. Abbreviations: IBM...
<p>Fold change values from the microarray analyses compared to quantification of mRNA expression by ...
<p>(A) QPCR analysis. Normalised mean of differences in expression between control (grey bars) and M...
<p>Cells were treated with 30 μM of Cmpd 1 and Cmpd 2 for 24 h. RNA was prepared and HIV expression ...
<p>The statistical model calculated a posterior probability distribution over the mean of the log no...
Treatment groups and experimental details as described in Fig 2. Expression value of each gene was n...
Treatment groups and sampling for RNA extraction as described in Fig 2. Expression value of each gen...
(A) , (B) , (C) . Gene-specific primers for and genes were used. The expression value of the gene...
<p><b>(A)</b> RT-qPCR analysis of mRNA expression of the indicated IEGs in serum starved HeLa(GalELK...
<p>(A) A subset of genes that were differentially regulated by OX<sub>1</sub> signaling in the RNA-S...
<p>(A) HEK 293T cells were transfected with Pol II-driven GFP reporters and either PA-X or an empty ...
<p>Relative gene expression (RGE) (in grey) in the four samples assayed: the resistant ‘Rojo Pasión’...
(A) , (B) , (C) . Gene-specific primers for and genes were used. The expression value of the gene...
<p>HEK293 cells transfected with a plasmid pool, that included the plasmids listed in <a href="http:...
<p>RT-qPCR analysis comparing the relative gene expression levels of PAX6 and NESTIN in the EBs from...
<p>Panel A illustrates <i>hsp90</i>, B; <i>hsp70</i>, C; <i>hsp40</i>, D; hydrophobin, E; <i>Y20</i>...
<p>Fold change values from the microarray analyses compared to quantification of mRNA expression by ...
<p>(A) QPCR analysis. Normalised mean of differences in expression between control (grey bars) and M...
<p>Cells were treated with 30 μM of Cmpd 1 and Cmpd 2 for 24 h. RNA was prepared and HIV expression ...
<p>The statistical model calculated a posterior probability distribution over the mean of the log no...
Treatment groups and experimental details as described in Fig 2. Expression value of each gene was n...
Treatment groups and sampling for RNA extraction as described in Fig 2. Expression value of each gen...
(A) , (B) , (C) . Gene-specific primers for and genes were used. The expression value of the gene...
<p><b>(A)</b> RT-qPCR analysis of mRNA expression of the indicated IEGs in serum starved HeLa(GalELK...
<p>(A) A subset of genes that were differentially regulated by OX<sub>1</sub> signaling in the RNA-S...
<p>(A) HEK 293T cells were transfected with Pol II-driven GFP reporters and either PA-X or an empty ...
<p>Relative gene expression (RGE) (in grey) in the four samples assayed: the resistant ‘Rojo Pasión’...
(A) , (B) , (C) . Gene-specific primers for and genes were used. The expression value of the gene...
<p>HEK293 cells transfected with a plasmid pool, that included the plasmids listed in <a href="http:...
<p>RT-qPCR analysis comparing the relative gene expression levels of PAX6 and NESTIN in the EBs from...
<p>Panel A illustrates <i>hsp90</i>, B; <i>hsp70</i>, C; <i>hsp40</i>, D; hydrophobin, E; <i>Y20</i>...
<p>Fold change values from the microarray analyses compared to quantification of mRNA expression by ...
<p>(A) QPCR analysis. Normalised mean of differences in expression between control (grey bars) and M...
<p>Cells were treated with 30 μM of Cmpd 1 and Cmpd 2 for 24 h. RNA was prepared and HIV expression ...