<p>Right: Solvent accessible surface area of base atoms d) N3-H e) O2 and f) O4 or N4H2 in case of thymine or cytosine, respectively, as a function of the base flip angle. Data from the simulation of the C:G and T:A pairs are plotted in black and green, respectively, data for the T:G mispair is shown in red. For atom labels see <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0053305#pone-0053305-g002" target="_blank">Figure 2</a>.</p
<p>The Lee-Richards–type SASA [<a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal...
<p>The final snapshots obtained from the MD simulations in water and in the gas phase at the main ch...
Hydrogen bonds profoundly influence the architecture and activity of biological macromolecules. Deep...
<p>(A) Hydrogen bonding profile indicating numbers of hydrogen bonds formed within protein atoms and...
<p>Hydrogen bonds of C and T with bulk water are listed, too. G and A are the corresponding bases on...
<p>(A) The average number of hydrogen bonds over the MD simulation between water and, in blue, the p...
<p>Plot of the H-bond length for the central A⋯T bp of the model M3, for a MD simulation of 950 ns a...
<p>A) Water distribution in the wt-hPAH. The protein surface atoms are colored from yellow to blue a...
<p>Residues involved in hydrogen bonds (HB) are depicted in ball and sticks and colored by ΔOcc (del...
<p>The pseudo dihedral coordinate is illustrated in <a href="http://www.plosone.org/article/info:doi...
<p>Averaged solvent accessible surface area for residues from G312 to Y327 (A). Ensemble averaged nu...
<p>[a] Occupancy of hydrogen bonds (The occupancy >70% were listed).</p><p>[b] Hydrogen bond distanc...
[[abstract]]The solvent molecular distribution significantly affects the behavior of the solute mole...
<p>(a) Hydrogen bonds for HDAC2-C8 complex (yellow). (b) Hydrogen bonds for HDAC8-C8 complex (green)...
We calculated solvent accessibility of DNA backbone hydrogen sites, H1\u27-H5\u27 by using molecular...
<p>The Lee-Richards–type SASA [<a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal...
<p>The final snapshots obtained from the MD simulations in water and in the gas phase at the main ch...
Hydrogen bonds profoundly influence the architecture and activity of biological macromolecules. Deep...
<p>(A) Hydrogen bonding profile indicating numbers of hydrogen bonds formed within protein atoms and...
<p>Hydrogen bonds of C and T with bulk water are listed, too. G and A are the corresponding bases on...
<p>(A) The average number of hydrogen bonds over the MD simulation between water and, in blue, the p...
<p>Plot of the H-bond length for the central A⋯T bp of the model M3, for a MD simulation of 950 ns a...
<p>A) Water distribution in the wt-hPAH. The protein surface atoms are colored from yellow to blue a...
<p>Residues involved in hydrogen bonds (HB) are depicted in ball and sticks and colored by ΔOcc (del...
<p>The pseudo dihedral coordinate is illustrated in <a href="http://www.plosone.org/article/info:doi...
<p>Averaged solvent accessible surface area for residues from G312 to Y327 (A). Ensemble averaged nu...
<p>[a] Occupancy of hydrogen bonds (The occupancy >70% were listed).</p><p>[b] Hydrogen bond distanc...
[[abstract]]The solvent molecular distribution significantly affects the behavior of the solute mole...
<p>(a) Hydrogen bonds for HDAC2-C8 complex (yellow). (b) Hydrogen bonds for HDAC8-C8 complex (green)...
We calculated solvent accessibility of DNA backbone hydrogen sites, H1\u27-H5\u27 by using molecular...
<p>The Lee-Richards–type SASA [<a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal...
<p>The final snapshots obtained from the MD simulations in water and in the gas phase at the main ch...
Hydrogen bonds profoundly influence the architecture and activity of biological macromolecules. Deep...