<p>Schematic of the location of structural variants detected in individual clones compared to the 3D7 parent. The chromosomal location is indicated on the left, followed by the name of the clone harboring the structural variant (grey box). Dotted boxes indicate regions with low read coverage and absence of unique probes, which mask the exact size of deletions. Different members of gene families are color labeled. Deletions in clones marked with an asterisk are associated with recombination events shown in <a href="http://www.plosgenetics.org/article/info:doi/10.1371/journal.pgen.1003293#pgen-1003293-g006" target="_blank">Figure 6</a>.</p
<p>The cytological locations are only given for deletions or genes mapped on polytene chromosomes (w...
<div><p>The taxonomy of each species/strain is indicated on the left side of the figure. The CRISPR/...
<p>Below each bar chart of coverage values is a putative reconstruction of the copy number on each c...
<p>SNPs from 3D7, Dd2, W2 and HB3 clone tress were scattered around the genome. In contrast, structu...
<p>The REL606 genomic coordinates are shown on the x-axis, centered on the <i>oriC</i> origin of rep...
A: Heatmap of gene copy number profiles of individual T-PLL samples highlighting deletions (blue), d...
<p>A) Phylogenetic structure of the cDNA clone population (tree reconstructed using MrBayes). All vi...
<p><b>A)</b> Late passage of T25 clone expressing endogenous level of TOP2A. <b>B)</b> Late passage ...
<p>The number of times a particular nt was found to be deleted upon sequence analysis is represented...
<p>Colored circles represent the chromosomes and contigs in each genome (one color gradient/genome)....
<p>SNPs are shown in black/grey, insertions in red, deletions in blue, and complex variants in orang...
<p>Chromosome numbers are indicated on the left; large black circles represent centromere locations....
<p>Genomic regions identified by DNA sequencing of reproducibly filamentous clones. The individual g...
<p>For deletions A, 1, 5, 7 and 12, both breakpoint regions joined by the deletion are shown. These ...
<p>Schematic representation of the deletions on the <i>S. epidermidis</i> RP62a genome. Wild-type se...
<p>The cytological locations are only given for deletions or genes mapped on polytene chromosomes (w...
<div><p>The taxonomy of each species/strain is indicated on the left side of the figure. The CRISPR/...
<p>Below each bar chart of coverage values is a putative reconstruction of the copy number on each c...
<p>SNPs from 3D7, Dd2, W2 and HB3 clone tress were scattered around the genome. In contrast, structu...
<p>The REL606 genomic coordinates are shown on the x-axis, centered on the <i>oriC</i> origin of rep...
A: Heatmap of gene copy number profiles of individual T-PLL samples highlighting deletions (blue), d...
<p>A) Phylogenetic structure of the cDNA clone population (tree reconstructed using MrBayes). All vi...
<p><b>A)</b> Late passage of T25 clone expressing endogenous level of TOP2A. <b>B)</b> Late passage ...
<p>The number of times a particular nt was found to be deleted upon sequence analysis is represented...
<p>Colored circles represent the chromosomes and contigs in each genome (one color gradient/genome)....
<p>SNPs are shown in black/grey, insertions in red, deletions in blue, and complex variants in orang...
<p>Chromosome numbers are indicated on the left; large black circles represent centromere locations....
<p>Genomic regions identified by DNA sequencing of reproducibly filamentous clones. The individual g...
<p>For deletions A, 1, 5, 7 and 12, both breakpoint regions joined by the deletion are shown. These ...
<p>Schematic representation of the deletions on the <i>S. epidermidis</i> RP62a genome. Wild-type se...
<p>The cytological locations are only given for deletions or genes mapped on polytene chromosomes (w...
<div><p>The taxonomy of each species/strain is indicated on the left side of the figure. The CRISPR/...
<p>Below each bar chart of coverage values is a putative reconstruction of the copy number on each c...