<p>The inter-sheet distances for the models 16–21, 27–32, 30–42 and 35–42 were calculated by averaging the mass center distance between backbone residues of 16–21, 27–32, 30–42 and 35–42 respectively. The results are the average of two independent simulation of each system. Red, 16–21P; green, 16–21AP; blue, 27–32; pink, 35–42; cyano, 30–42.</p
<p>MD trajectories of E1·Mg<sup>2+</sup> (black) and E1·2K<sup>+</sup> (red) were used to calculate ...
<p><i>A</i>. Simulations for MA. <i>B</i>. Simulations for NH<sub>3</sub> in wild type AmtB (traject...
<p>a) Top panel shows a heatmap of the morphological distances in bud and mother cells indicated as ...
<p>A) 16–21P and (B) 16–21AP. The results are the average of two independent simulation of each syst...
<p>Distance between residues (A) E771-D800 on TM5-TM6, (B) E771-E908 on TM5-TM8, and (C) D800-E908 o...
<p>Variation of the distances of the center of mass of the two subunits of bOBP during the time, for...
<p>(A) Average distance between the center of mass of bulk subunits along the four GC-T4P 4-start he...
<p>Time evolution of the distances between Cα atoms of zebrafish residue pairs 481–567 (panel A), 48...
<p>Data for the dimerising trajectories are shown in <i>gray</i>, and averages shown in <i>green</i>...
<p>N-terminal stability between the two dimeric systems (with and without metal ion) is quantified b...
<p>Simulations form pdbs 2J1X (Fig. 4 a; μ = 3.169 and σ = 0.323) and 2VUK (Fig. 4 b; μ = 3.165 and ...
a) and b) Atom-positional RMSD (Å) from the starting structures as observed during the two represent...
<p>A) Variation of the atomic distance d(R/H681, CA - H679’, O) as a characteristic proximal inter-s...
<p>The interatomic distances of the six representative bonds under stretching were plotted against s...
<p>The center image is the time-dependence of distances at the connection sites between the residues...
<p>MD trajectories of E1·Mg<sup>2+</sup> (black) and E1·2K<sup>+</sup> (red) were used to calculate ...
<p><i>A</i>. Simulations for MA. <i>B</i>. Simulations for NH<sub>3</sub> in wild type AmtB (traject...
<p>a) Top panel shows a heatmap of the morphological distances in bud and mother cells indicated as ...
<p>A) 16–21P and (B) 16–21AP. The results are the average of two independent simulation of each syst...
<p>Distance between residues (A) E771-D800 on TM5-TM6, (B) E771-E908 on TM5-TM8, and (C) D800-E908 o...
<p>Variation of the distances of the center of mass of the two subunits of bOBP during the time, for...
<p>(A) Average distance between the center of mass of bulk subunits along the four GC-T4P 4-start he...
<p>Time evolution of the distances between Cα atoms of zebrafish residue pairs 481–567 (panel A), 48...
<p>Data for the dimerising trajectories are shown in <i>gray</i>, and averages shown in <i>green</i>...
<p>N-terminal stability between the two dimeric systems (with and without metal ion) is quantified b...
<p>Simulations form pdbs 2J1X (Fig. 4 a; μ = 3.169 and σ = 0.323) and 2VUK (Fig. 4 b; μ = 3.165 and ...
a) and b) Atom-positional RMSD (Å) from the starting structures as observed during the two represent...
<p>A) Variation of the atomic distance d(R/H681, CA - H679’, O) as a characteristic proximal inter-s...
<p>The interatomic distances of the six representative bonds under stretching were plotted against s...
<p>The center image is the time-dependence of distances at the connection sites between the residues...
<p>MD trajectories of E1·Mg<sup>2+</sup> (black) and E1·2K<sup>+</sup> (red) were used to calculate ...
<p><i>A</i>. Simulations for MA. <i>B</i>. Simulations for NH<sub>3</sub> in wild type AmtB (traject...
<p>a) Top panel shows a heatmap of the morphological distances in bud and mother cells indicated as ...
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