Utilizing RADseq data for phylogenetic analysis of challenging taxonomic groups: A case study in Carex sect. Racemosae

Data from: Resolving rapid radiations within angiosperm families using anchored phylogenomics

Léveillé-Bourret, Étienne
Starr, Julian R.
Ford, Bruce A.
Moriarty Lemmon, Emily
Lemmon, Alan R.

May 2017

Despite the promise that molecular data would provide a seemingly unlimited source of independent ch...

Are phylogenies resolved at the genus level appropriate for studies on phylogenetic structure of species assemblages?

Hong Qian
Yi Jin

August 2021

Phylogenies are essential to studies investigating the effect of evolutionary history on assembly of...

Fitting Classification to Match Evolution: A Case of Molecular Systematics in the Plant Genus Columnea (Gesneriaceae).

Prior, Carly
Smith, James F.
Ooi, Maggie
Clark, John L.
Amaya M, Marisol

April 2013

Large taxa with many species are difficult to study evolutionarily because sampling all species at o...

Data from: Utilizing RADseq data for phylogenetic analysis of challenging taxonomic groups: a case-study in Carex sect. Racemosae

Massatti, Rob
Reznicek, Anton A.
Knowles, L. Lacey

February 2016

PREMISE OF THE STUDY: Relationships among closely related and recently diverged taxa can be especial...

Data from: Inferring phylogeny and introgression using RADseq data: an example from flowering plants (Pedicularis: Orobanchaceae)

Eaton, Deren A. R.
Ree, Richard H.

Phylogenetic relationships among recently diverged species are often difficult to resolve due to ins...

Comprehensive systematic approaches to understanding species diversity: a case study utilizing a non-model group of sedges, Carex sect. Acrocystis (Cyperaceae)

Poindexter, Derick Bret

January 2020

For nearly two and half millennia we have struggled to characterize life on earth. In the face of ou...

How challenging RADseq data turned out to favor coalescent-based species tree inference. A case study in Aichryson (Crassulaceae)

Hühn, Philipp
Dillenberger, Markus S.
Gerschwitz-Eidt, Michael
Hörandl, Elvira
Los, Jessica A.
Messerschmid, Thibaud F. E.
Paetzold, Claudia
Rieger, Benjamin
Kadereit, Gudrun

January 2022

Analysing multiple genomic regions while incorporating detection and qualification of discordance am...

Phylogenetic Relationships in Tribe Cariceae (Cyperaceae) Based on Nested Analyses of Four Molecular Data Sets

Waterway, Marcia J
Starr, Julian R

December 2007

Phylogenetic reconstruction for Carex and relatives in tribe Cariceae is complicated by species rich...

Data from: Deep phylogenetic incongruence in the angiosperm clade Rosidae

Sun, Miao
Soltis, Douglas E.
Soltis, Pamela S.
Zhu, Xinyu
Burleigh, J. Gordon
Chen, Zhiduan

November 2014

Analysis of large data sets can help resolve difficult nodes in the tree of life and also reveal com...

Phylogeny, systematics, and trait evolution of Carex section Glareosae

Maguilla, Enrique
Escudero, Marcial
Waterway, M.J.
Hipp, A.L.
Luceño, Modesto

September 2015

Data from: A framework phylogeny of the American oak clade based on sequenced RAD data

Hipp, Andrew L.
Eaton, Deren A. R.
Cavender-Bares, Jeannine
Fitzek, Elisabeth
Nipper, Rick
Manos, Paul S.

Previous phylogenetic studies in oaks (Quercus, Fagaceae) have failed to resolve the backbone topolo...

Species limits, phylogeny and niche evolution: a case study in «Carex» (Cyperaceae)

Smith, Tyler William

January 2007

Two conflicting processes are believed to influence the relationship between taxonomic and ecologica...

A Framework Phylogeny of the American Oak Clade Based on Sequenced RAD Data

Andrew L. Hipp (508078)
Deren A. R. Eaton (547685)
Jeannine Cavender-Bares (263456)
Elisabeth Fitzek (547686)
Rick Nipper (547687)
Paul S. Manos (547688)

April 2014

<div><p>Previous phylogenetic studies in oaks (<i>Quercus</i>, Fagaceae) have failed to resolve the ...

Megaphylogenetic Specimen-Level Approaches to the Carex (Cyperaceae) Phylogeny Using ITS, ETS, and matK Sequences: Implications for Classification

Roalson, Eric H.
Villlaverde, Tamara
Jiménez Mejías, Pedro
Hahn, Marlene
Escudero Lirio, Marcial
Waterway, Marcia J.
Global Carex Group
Maguilla Salado, Enrique

January 2016

We present the first large-scale phylogenetic hypothesis for the genus Carex based on 996 of the 198...

Chromosome Number Changes Associated with Speciation in Sedges: a Phylogenetic Study in Carex section Ovales (Cyperaceae) Using AFLP Data

Hipp, Andrew L
Rothrock, Paul E
Reznicek, Anton A
Berry, Paul E

December 2007

Phylogenetic analysis of ampliﬁed fragment length polymorphisms (AFLP) was used to infer patterns of...

Data from: Resolving rapid radiations within angiosperm families using anchored phylogenomics

Léveillé-Bourret, Étienne
Starr, Julian R.
Ford, Bruce A.
Moriarty Lemmon, Emily
Lemmon, Alan R.

May 2017

Despite the promise that molecular data would provide a seemingly unlimited source of independent ch...

Are phylogenies resolved at the genus level appropriate for studies on phylogenetic structure of species assemblages?

Hong Qian
Yi Jin

August 2021

Phylogenies are essential to studies investigating the effect of evolutionary history on assembly of...

Fitting Classification to Match Evolution: A Case of Molecular Systematics in the Plant Genus Columnea (Gesneriaceae).

Prior, Carly
Smith, James F.
Ooi, Maggie
Clark, John L.
Amaya M, Marisol

April 2013

Large taxa with many species are difficult to study evolutionarily because sampling all species at o...

Data from: Utilizing RADseq data for phylogenetic analysis of challenging taxonomic groups: a case-study in Carex sect. Racemosae

Massatti, Rob
Reznicek, Anton A.
Knowles, L. Lacey

February 2016

PREMISE OF THE STUDY: Relationships among closely related and recently diverged taxa can be especial...

Data from: Inferring phylogeny and introgression using RADseq data: an example from flowering plants (Pedicularis: Orobanchaceae)

Eaton, Deren A. R.
Ree, Richard H.

Phylogenetic relationships among recently diverged species are often difficult to resolve due to ins...

Comprehensive systematic approaches to understanding species diversity: a case study utilizing a non-model group of sedges, Carex sect. Acrocystis (Cyperaceae)

Poindexter, Derick Bret

January 2020

For nearly two and half millennia we have struggled to characterize life on earth. In the face of ou...

How challenging RADseq data turned out to favor coalescent-based species tree inference. A case study in Aichryson (Crassulaceae)

Hühn, Philipp
Dillenberger, Markus S.
Gerschwitz-Eidt, Michael
Hörandl, Elvira
Los, Jessica A.
Messerschmid, Thibaud F. E.
Paetzold, Claudia
Rieger, Benjamin
Kadereit, Gudrun

January 2022

Analysing multiple genomic regions while incorporating detection and qualification of discordance am...

Phylogenetic Relationships in Tribe Cariceae (Cyperaceae) Based on Nested Analyses of Four Molecular Data Sets

Waterway, Marcia J
Starr, Julian R

December 2007

Phylogenetic reconstruction for Carex and relatives in tribe Cariceae is complicated by species rich...

Data from: Deep phylogenetic incongruence in the angiosperm clade Rosidae

Sun, Miao
Soltis, Douglas E.
Soltis, Pamela S.
Zhu, Xinyu
Burleigh, J. Gordon
Chen, Zhiduan

November 2014

Analysis of large data sets can help resolve difficult nodes in the tree of life and also reveal com...

Phylogeny, systematics, and trait evolution of Carex section Glareosae

Maguilla, Enrique
Escudero, Marcial
Waterway, M.J.
Hipp, A.L.
Luceño, Modesto

September 2015

Data from: A framework phylogeny of the American oak clade based on sequenced RAD data

Hipp, Andrew L.
Eaton, Deren A. R.
Cavender-Bares, Jeannine
Fitzek, Elisabeth
Nipper, Rick
Manos, Paul S.

Previous phylogenetic studies in oaks (Quercus, Fagaceae) have failed to resolve the backbone topolo...

Species limits, phylogeny and niche evolution: a case study in «Carex» (Cyperaceae)

Smith, Tyler William

January 2007

Two conflicting processes are believed to influence the relationship between taxonomic and ecologica...

A Framework Phylogeny of the American Oak Clade Based on Sequenced RAD Data

Andrew L. Hipp (508078)
Deren A. R. Eaton (547685)
Jeannine Cavender-Bares (263456)
Elisabeth Fitzek (547686)
Rick Nipper (547687)
Paul S. Manos (547688)

April 2014

<div><p>Previous phylogenetic studies in oaks (<i>Quercus</i>, Fagaceae) have failed to resolve the ...

Megaphylogenetic Specimen-Level Approaches to the Carex (Cyperaceae) Phylogeny Using ITS, ETS, and matK Sequences: Implications for Classification

Roalson, Eric H.
Villlaverde, Tamara
Jiménez Mejías, Pedro
Hahn, Marlene
Escudero Lirio, Marcial
Waterway, Marcia J.
Global Carex Group
Maguilla Salado, Enrique

January 2016

We present the first large-scale phylogenetic hypothesis for the genus Carex based on 996 of the 198...

Chromosome Number Changes Associated with Speciation in Sedges: a Phylogenetic Study in Carex section Ovales (Cyperaceae) Using AFLP Data

Hipp, Andrew L
Rothrock, Paul E
Reznicek, Anton A
Berry, Paul E

December 2007

Phylogenetic analysis of ampliﬁed fragment length polymorphisms (AFLP) was used to infer patterns of...

Data from: Resolving rapid radiations within angiosperm families using anchored phylogenomics

Léveillé-Bourret, Étienne
Starr, Julian R.
Ford, Bruce A.
Moriarty Lemmon, Emily
Lemmon, Alan R.

May 2017

Despite the promise that molecular data would provide a seemingly unlimited source of independent ch...

Are phylogenies resolved at the genus level appropriate for studies on phylogenetic structure of species assemblages?

Hong Qian
Yi Jin

August 2021

Phylogenies are essential to studies investigating the effect of evolutionary history on assembly of...

Fitting Classification to Match Evolution: A Case of Molecular Systematics in the Plant Genus Columnea (Gesneriaceae).

Prior, Carly
Smith, James F.
Ooi, Maggie
Clark, John L.
Amaya M, Marisol

April 2013

Large taxa with many species are difficult to study evolutionarily because sampling all species at o...

Utilizing RADseq data for phylogenetic analysis of challenging taxonomic groups: A case study in Carex sect. Racemosae

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