Proportion of samples with positive detection of D222G/N quasispecies in patients with positive viral RNA detection outside the respiratory system.

Herman Tse (141236)
Kelvin K. W. To (343276)
Xi Wen (292180)
Honglin Chen (83242)
Kwok-Hung Chan (156922)
Hoi-Wah Tsoi (141245)
Iris W. S. Li (343279)
Kwok-Yung Yuen (2377228)

Publication date

February 2013

DOI

10.1371/journal.pone.0022534.g001

Abstract

Proportion of samples with positive detection of D222G/N quasispecies in patients with positive viral RNA detection outside the respiratory system.</p

Extracted data

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Data Protection

Proportion of samples with positive detection of D222G/N quasispecies in patients with positive viral RNA detection outside the respiratory system.

Herman Tse (141236)
Kelvin K. W. To (343276)
Xi Wen (292180)
Honglin Chen (83242)
Kwok-Hung Chan (156922)
Hoi-Wah Tsoi (141245)
Iris W. S. Li (343279)
Kwok-Yung Yuen (2377228)

Open link

Publication date

February 2013

DOI

10.1371/journal.pone.0022534.g001

Abstract

Proportion of samples with positive detection of D222G/N quasispecies in patients with positive viral RNA detection outside the respiratory system.</p

Extracted data

Anne-Claire Andries (106892)
Veasna Duong (106893)
Sowath Ly (160224)
Julien Cappelle (52864)
Kim Srorn Kim (800201)
Patrich Lorn Try (106900)
Sopheaktra Ros (800202)
Sivuth Ong (106895)
Rekol Huy (106896)
Paul Horwood (800203)
Marie Flamand (336781)
Anavaj Sakuntabhai (50927)
Arnaud Tarantola (517324)
Philippe Buchy (106901)

September 2015

NA: No sample AvailablePercentage of positivity (number of positive samples/total number o...

HRV RNA positivity in sera among patients positive for HRV in nasopharyngeal samples.

Naoko Fuji (339968)
Akira Suzuki (178307)
Socorro Lupisan (339971)
Lydia Sombrero (339972)
Hazel Galang (339973)
Taro Kamigaki (178287)
Raita Tamaki (339974)
Mariko Saito (339975)
Rapunzel Aniceto (339976)
Remigio Olveda (62198)
Hitoshi Oshitani (178316)

February 2013

First serum samples were collected on the day of admission (S-1). Second serum samples were colle...

The proportion of patients with a detectable viral load (≥400 copies/ml) at study visits using three viral load assays (Cavidi reverse transcriptase (RT) assay, Roche RNA PCR, and branched DNA assay [bDNA]).

Sumathi Sivapalasingam (370822)
Beatrice Wangechi (370823)
Fatuma Marshed (370824)
Maura Laverty (370825)
Shaffiq Essajee (363292)
Robert S. Holzman (370826)
Fred Valentine (370827)

February 2013

The proportion of patients with a detectable viral load (≥400 copies/ml) at study visits using th...

Proportion of each respiratory viruses detected by mPCR in viral mono or co-infection.

Benoit Visseaux (288245)
Gilles Collin (780716)
Houria Ichou (3779554)
Charlotte Charpentier (49588)
Samia Bendhafer (3779560)
Madalina Dumitrescu (3779557)
Lahcene Allal (3779563)
Bogdan Cojocaru (1567105)
Luc Desfrère (3779566)
Diane Descamps (266281)
Laurent Mandelbrot (371836)
Nadhira Houhou-Fidouh (3440990)

February 2017

Proportion of each respiratory viruses detected by mPCR in viral mono or co-infection.</p

Detection of DENV RNA by qRT-PCR in plasma, urine and saliva specimens.

Anne-Claire Andries (106892)
Veasna Duong (106893)
Sowath Ly (160224)
Julien Cappelle (52864)
Kim Srorn Kim (800201)
Patrich Lorn Try (106900)
Sopheaktra Ros (800202)
Sivuth Ong (106895)
Rekol Huy (106896)
Paul Horwood (800203)
Marie Flamand (336781)
Anavaj Sakuntabhai (50927)
Arnaud Tarantola (517324)
Philippe Buchy (106901)

September 2015

Percentage of plasma, urine and saliva specimens that tested positive for DENV RNA, by day of sam...

Number of samples tested, positivity rates and viral findings by season, area of the respiratory tract sampled, type of medical unit and age group.

Benoit Visseaux (288245)
Charles Burdet (3440975)
Guillaume Voiriot (3441002)
François-Xavier Lescure (738355)
Taous Chougar (4249003)
Olivier Brugière (466069)
Bruno Crestani (288325)
Enrique Casalino (131008)
Charlotte Charpentier (49588)
Diane Descamps (266281)
Jean-François Timsit (58724)
Yazdan Yazdanpanah (237840)
Nadhira Houhou-Fidouh (3440990)

July 2017

Number of samples tested, positivity rates and viral findings by season, area of the respiratory ...

Quantitative detection of total and defective HCV RNA in a subset of patients who carried defective HCV forms.

Cristina Cheroni (256590)
Lorena Donnici (178727)
Alessio Aghemo (554614)
Francesca Balistreri (800510)
Annalisa Bianco (178719)
Valeria Zanoni (800511)
Massimiliano Pagani (173599)
Roberta Soffredini (554621)
Roberta D’Ambrosio (800512)
Maria Grazia Rumi (554616)
Massimo Colombo (470426)
Sergio Abrignani (173604)
Petra Neddermann (178757)
Raffaele De Francesco (178760)

September 2015

Quantitative detection of total and defective HCV RNA in a subset of patients who carried defecti...

Number of RRT-PCR influenza A virus positive samples and average daily viral load (expressed in Log TCID50 equi/ml) in positive nasal swabs, oral fluids and air samples from vaccinated and non-vaccinated groups.

Victor Neira (845361)
Matt Allerson (5243885)
Cesar Corzo (5243882)
Marie Culhane (443283)
Aaron Rendahl (474369)
Montserrat Torremorell (425036)

May 2018

Number of RRT-PCR influenza A virus positive samples and average daily viral load (expressed in L...

Number of patients positive by RDT (in red) and nasopharyngeal PCR (in blue) and sensitivity of RDT according to viral load categories.

Jean-Marc Schwob (14675716)
Alix Miauton (12697664)
Dusan Petrovic (3511739)
Jean Perdrix (14675719)
Nicolas Senn (137902)
Alexandre Gouveia (6092213)
Katia Jaton (530717)
Onya Opota (203293)
Alain Maillard (14675722)
Gianni Minghelli (14675725)
Jacques Cornuz (43512)
Gilbert Greub (39465)
Blaise Genton (67109)
Valérie D’Acremont (729622)

February 2023

Number of patients positive by RDT (in red) and nasopharyngeal PCR (in blue) and sensitivity of RDT ...

Proportion of responders with HIV-1 RNA <40 copies/mL (Week 24 snapshot) (mITT).

Javier Morales-Ramirez (5883683)
Johannes R. Bogner (469768)
Jean-Michel Molina (288240)
Johan Lombaard (5883686)
Ira B. Dicker (2618830)
David A. Stock (2639869)
Michelle DeGrosky (183364)
Margaret Gartland (5883689)
Teodora Pene Dumitrescu (2437291)
Sherene Min (5883692)
Cyril Llamoso (5883695)
Samit R. Joshi (5883698)
Max Lataillade (183356)

October 2018

Proportion of responders with HIV-1 RNA <40 copies/mL (Week 24 snapshot) (mITT).</p

Detection rates of COVID patients by RDT, nasopharyngeal PCR and saliva PCR.

Jean-Marc Schwob (14675716)
Alix Miauton (12697664)
Dusan Petrovic (3511739)
Jean Perdrix (14675719)
Nicolas Senn (137902)
Alexandre Gouveia (6092213)
Katia Jaton (530717)
Onya Opota (203293)
Alain Maillard (14675722)
Gianni Minghelli (14675725)
Jacques Cornuz (43512)
Gilbert Greub (39465)
Blaise Genton (67109)
Valérie D’Acremont (729622)

February 2023

A) all positive patients; B) positive patients with viral loads ≥106 copies/ml by any PCR (supposedl...

Crude proportion of respiratory samples from hospitalized children testing positive for influenza by age group, study design, and population.

Kathryn E. Lafond (2580313)
Harish Nair (204217)
Mohammad Hafiz Rasooly (2580319)
Fátima Valente (2580283)
Robert Booy (126402)
Mahmudur Rahman (331683)
Paul Kitsutani (292631)
Hongjie Yu (16137)
Guiselle Guzman (2580304)
Daouda Coulibaly (2580280)
Julio Armero (816194)
Daddi Jima (363200)
Stephen R. C. Howie (42318)
William Ampofo (695453)
Ricardo Mena (2580316)
Mandeep Chadha (336230)
Ondri Dwi Sampurno (336083)
Gideon O. Emukule (542444)
Zuridin Nurmatov (2580289)
Andrew Corwin (292632)
Jean Michel Heraud (191113)
Daniel E. Noyola (663918)
Radu Cojocaru (2580310)
Pagbajabyn Nymadawa (178312)
Amal Barakat (344817)
Adebayo Adedeji (2580292)
Marta von Horoch (2580295)
Remigio Olveda (62198)
Thierry Nyatanyi (318121)
Marietjie Venter (552145)
Vida Mmbaga (2580286)
Malinee Chittaganpitch (226215)
Tran Hien Nguyen (2580301)
Andros Theo (2580298)
Melissa Whaley (2580307)
Eduardo Azziz-Baumgartner (13157)
Joseph Bresee (123346)
Harry Campbell (30339)
Marc-Alain Widdowson (123352)

March 2016

Crude proportion of respiratory samples from hospitalized children testing positive for influenza...

Percentage of samples collected for wild bird influenza virus surveillance by avian functional group (a); and the proportion of samples by avian functional group (b) that were influenza virus positive by M gene rRT-PCR (n = 197,885).

Sarah N. Bevins (333447)
Kerri Pedersen (329831)
Mark W. Lutman (329832)
John A. Baroch (613803)
Brandon S. Schmit (613804)
Dennis Kohler (471577)
Thomas Gidlewski (516612)
Dale L. Nolte (613805)
Seth R. Swafford (329833)
Thomas J. DeLiberto (613806)

August 2014

Percentage of samples collected for wild bird influenza virus surveillance by avian functional gr...

Results of viral genome and NS1 protein detection in saliva, urine and plasma samples collected from the same patients at the same time-points by time of sampling after onset of fever.

Anne-Claire Andries (106892)
Veasna Duong (106893)
Sowath Ly (160224)
Julien Cappelle (52864)
Kim Srorn Kim (800201)
Patrich Lorn Try (106900)
Sopheaktra Ros (800202)
Sivuth Ong (106895)
Rekol Huy (106896)
Paul Horwood (800203)
Marie Flamand (336781)
Anavaj Sakuntabhai (50927)
Arnaud Tarantola (517324)
Philippe Buchy (106901)

September 2015

NA: No sample AvailablePercentage of positivity (number of positive samples/total number o...

HRV RNA positivity in sera among patients positive for HRV in nasopharyngeal samples.

Naoko Fuji (339968)
Akira Suzuki (178307)
Socorro Lupisan (339971)
Lydia Sombrero (339972)
Hazel Galang (339973)
Taro Kamigaki (178287)
Raita Tamaki (339974)
Mariko Saito (339975)
Rapunzel Aniceto (339976)
Remigio Olveda (62198)
Hitoshi Oshitani (178316)

February 2013

First serum samples were collected on the day of admission (S-1). Second serum samples were colle...

Sumathi Sivapalasingam (370822)
Beatrice Wangechi (370823)
Fatuma Marshed (370824)
Maura Laverty (370825)
Shaffiq Essajee (363292)
Robert S. Holzman (370826)
Fred Valentine (370827)

February 2013

The proportion of patients with a detectable viral load (≥400 copies/ml) at study visits using th...

Proportion of each respiratory viruses detected by mPCR in viral mono or co-infection.

Benoit Visseaux (288245)
Gilles Collin (780716)
Houria Ichou (3779554)
Charlotte Charpentier (49588)
Samia Bendhafer (3779560)
Madalina Dumitrescu (3779557)
Lahcene Allal (3779563)
Bogdan Cojocaru (1567105)
Luc Desfrère (3779566)
Diane Descamps (266281)
Laurent Mandelbrot (371836)
Nadhira Houhou-Fidouh (3440990)

February 2017

Proportion of each respiratory viruses detected by mPCR in viral mono or co-infection.</p

Detection of DENV RNA by qRT-PCR in plasma, urine and saliva specimens.

Anne-Claire Andries (106892)
Veasna Duong (106893)
Sowath Ly (160224)
Julien Cappelle (52864)
Kim Srorn Kim (800201)
Patrich Lorn Try (106900)
Sopheaktra Ros (800202)
Sivuth Ong (106895)
Rekol Huy (106896)
Paul Horwood (800203)
Marie Flamand (336781)
Anavaj Sakuntabhai (50927)
Arnaud Tarantola (517324)
Philippe Buchy (106901)

September 2015

Percentage of plasma, urine and saliva specimens that tested positive for DENV RNA, by day of sam...

Number of samples tested, positivity rates and viral findings by season, area of the respiratory tract sampled, type of medical unit and age group.

Benoit Visseaux (288245)
Charles Burdet (3440975)
Guillaume Voiriot (3441002)
François-Xavier Lescure (738355)
Taous Chougar (4249003)
Olivier Brugière (466069)
Bruno Crestani (288325)
Enrique Casalino (131008)
Charlotte Charpentier (49588)
Diane Descamps (266281)
Jean-François Timsit (58724)
Yazdan Yazdanpanah (237840)
Nadhira Houhou-Fidouh (3440990)

July 2017

Number of samples tested, positivity rates and viral findings by season, area of the respiratory ...

Quantitative detection of total and defective HCV RNA in a subset of patients who carried defective HCV forms.

Cristina Cheroni (256590)
Lorena Donnici (178727)
Alessio Aghemo (554614)
Francesca Balistreri (800510)
Annalisa Bianco (178719)
Valeria Zanoni (800511)
Massimiliano Pagani (173599)
Roberta Soffredini (554621)
Roberta D’Ambrosio (800512)
Maria Grazia Rumi (554616)
Massimo Colombo (470426)
Sergio Abrignani (173604)
Petra Neddermann (178757)
Raffaele De Francesco (178760)

September 2015

Quantitative detection of total and defective HCV RNA in a subset of patients who carried defecti...

Victor Neira (845361)
Matt Allerson (5243885)
Cesar Corzo (5243882)
Marie Culhane (443283)
Aaron Rendahl (474369)
Montserrat Torremorell (425036)

May 2018

Number of RRT-PCR influenza A virus positive samples and average daily viral load (expressed in L...

Number of patients positive by RDT (in red) and nasopharyngeal PCR (in blue) and sensitivity of RDT according to viral load categories.

Jean-Marc Schwob (14675716)
Alix Miauton (12697664)
Dusan Petrovic (3511739)
Jean Perdrix (14675719)
Nicolas Senn (137902)
Alexandre Gouveia (6092213)
Katia Jaton (530717)
Onya Opota (203293)
Alain Maillard (14675722)
Gianni Minghelli (14675725)
Jacques Cornuz (43512)
Gilbert Greub (39465)
Blaise Genton (67109)
Valérie D’Acremont (729622)

February 2023

Number of patients positive by RDT (in red) and nasopharyngeal PCR (in blue) and sensitivity of RDT ...

Proportion of responders with HIV-1 RNA <40 copies/mL (Week 24 snapshot) (mITT).

Javier Morales-Ramirez (5883683)
Johannes R. Bogner (469768)
Jean-Michel Molina (288240)
Johan Lombaard (5883686)
Ira B. Dicker (2618830)
David A. Stock (2639869)
Michelle DeGrosky (183364)
Margaret Gartland (5883689)
Teodora Pene Dumitrescu (2437291)
Sherene Min (5883692)
Cyril Llamoso (5883695)
Samit R. Joshi (5883698)
Max Lataillade (183356)

October 2018

Proportion of responders with HIV-1 RNA <40 copies/mL (Week 24 snapshot) (mITT).</p

Detection rates of COVID patients by RDT, nasopharyngeal PCR and saliva PCR.

Jean-Marc Schwob (14675716)
Alix Miauton (12697664)
Dusan Petrovic (3511739)
Jean Perdrix (14675719)
Nicolas Senn (137902)
Alexandre Gouveia (6092213)
Katia Jaton (530717)
Onya Opota (203293)
Alain Maillard (14675722)
Gianni Minghelli (14675725)
Jacques Cornuz (43512)
Gilbert Greub (39465)
Blaise Genton (67109)
Valérie D’Acremont (729622)

February 2023

A) all positive patients; B) positive patients with viral loads ≥106 copies/ml by any PCR (supposedl...

Crude proportion of respiratory samples from hospitalized children testing positive for influenza by age group, study design, and population.

Kathryn E. Lafond (2580313)
Harish Nair (204217)
Mohammad Hafiz Rasooly (2580319)
Fátima Valente (2580283)
Robert Booy (126402)
Mahmudur Rahman (331683)
Paul Kitsutani (292631)
Hongjie Yu (16137)
Guiselle Guzman (2580304)
Daouda Coulibaly (2580280)
Julio Armero (816194)
Daddi Jima (363200)
Stephen R. C. Howie (42318)
William Ampofo (695453)
Ricardo Mena (2580316)
Mandeep Chadha (336230)
Ondri Dwi Sampurno (336083)
Gideon O. Emukule (542444)
Zuridin Nurmatov (2580289)
Andrew Corwin (292632)
Jean Michel Heraud (191113)
Daniel E. Noyola (663918)
Radu Cojocaru (2580310)
Pagbajabyn Nymadawa (178312)
Amal Barakat (344817)
Adebayo Adedeji (2580292)
Marta von Horoch (2580295)
Remigio Olveda (62198)
Thierry Nyatanyi (318121)
Marietjie Venter (552145)
Vida Mmbaga (2580286)
Malinee Chittaganpitch (226215)
Tran Hien Nguyen (2580301)
Andros Theo (2580298)
Melissa Whaley (2580307)
Eduardo Azziz-Baumgartner (13157)
Joseph Bresee (123346)
Harry Campbell (30339)
Marc-Alain Widdowson (123352)

March 2016

Crude proportion of respiratory samples from hospitalized children testing positive for influenza...

Sarah N. Bevins (333447)
Kerri Pedersen (329831)
Mark W. Lutman (329832)
John A. Baroch (613803)
Brandon S. Schmit (613804)
Dennis Kohler (471577)
Thomas Gidlewski (516612)
Dale L. Nolte (613805)
Seth R. Swafford (329833)
Thomas J. DeLiberto (613806)

August 2014

Percentage of samples collected for wild bird influenza virus surveillance by avian functional gr...

Results of viral genome and NS1 protein detection in saliva, urine and plasma samples collected from the same patients at the same time-points by time of sampling after onset of fever.

Anne-Claire Andries (106892)
Veasna Duong (106893)
Sowath Ly (160224)
Julien Cappelle (52864)
Kim Srorn Kim (800201)
Patrich Lorn Try (106900)
Sopheaktra Ros (800202)
Sivuth Ong (106895)
Rekol Huy (106896)
Paul Horwood (800203)
Marie Flamand (336781)
Anavaj Sakuntabhai (50927)
Arnaud Tarantola (517324)
Philippe Buchy (106901)

September 2015

NA: No sample AvailablePercentage of positivity (number of positive samples/total number o...

HRV RNA positivity in sera among patients positive for HRV in nasopharyngeal samples.

Naoko Fuji (339968)
Akira Suzuki (178307)
Socorro Lupisan (339971)
Lydia Sombrero (339972)
Hazel Galang (339973)
Taro Kamigaki (178287)
Raita Tamaki (339974)
Mariko Saito (339975)
Rapunzel Aniceto (339976)
Remigio Olveda (62198)
Hitoshi Oshitani (178316)

February 2013

First serum samples were collected on the day of admission (S-1). Second serum samples were colle...

Proportion of samples with positive detection of D222G/N quasispecies in patients with positive viral RNA detection outside the respiratory system.

Abstract

Extracted data

Proportion of samples with positive detection of D222G/N quasispecies in patients with positive viral RNA detection outside the respiratory system.

Abstract

Extracted data

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