Top KEGG pathways enriched with differentially expressed genes and their corresponding Fisher's exact test p values.

Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis of the differentially expressed genes in each comparison groups.

Batu K. Sharma-Kuinkel (242751)
Yurong Zhang (104163)
Qin Yan (281622)
Sun Hee Ahn (104154)
Vance G. Fowler Jr (104199)

April 2013

*: p-value is calculated by using Fischer’s exact test calculating the ratio of the pathway-assoc...

KEGG pathway enrichment analysis of differentially expressed genes between TTCS and TTE75.

Bo Liu (127343)
Yuhong Zhang (268338)
Wei Zhang (405)

March 2014

KEGG pathway enrichment analysis of differentially expressed genes between TTCS and TTE75.</p

Top IPA pathways enriched with differentially expressed genes and their corresponding Fisher's exact test p values.

Zhining Wen (226349)
Zhijun Wang (31218)
Steven Wang (354193)
Ranadheer Ravula (354194)
Lun Yang (165433)
Jun Xu (45543)
Charles Wang (242565)
Zhong Zuo (354195)
Moses S. S. Chow (354196)
Leming Shi (22343)
Ying Huang (53474)

February 2013

*The ratio is calculated by dividing the number of differentially expressed genes found in the pa...

KEGG pathway enrichment of genes differentially expressed RA and OA vs. NT samples.

Zhan-Chun Li (523391)
Jie Xiao (113647)
Jin-Liang Peng (523392)
Jian-Wei Chen (452345)
Tao Ma (88669)
Guang-Qi Cheng (523393)
Yu-Qi Dong (523394)
Wei-li Wang (523395)
Zu-De Liu (523396)

February 2014

The number of differentially expressed genes in a specific pathway, enriched gene ID and adjusted...

KEGG analysis of enriched pathways of differentially expressed genes between two groups.

Bao Yi (495702)
Liang Chen (73736)
Renna Sa (728624)
Ruqing Zhong (3112197)
Huan Xing (3112200)
Hongfu Zhang (230929)

September 2016

KEGG analysis of enriched pathways of differentially expressed genes between two groups.</p

Significant enrichment analysis of differentially expressed genes in top 20 KEGG pathways.

Daizhen Zhang (5728403)
Jun Liu (42548)
Tingting Qi (710630)
Baoming Ge (5728406)
Qiuning Liu (5728409)
Senhao Jiang (5728412)
Huabin Zhang (798548)
Zhengfei Wang (303878)
Ge Ding (5728415)
Boping Tang (322718)

September 2018

Significant enrichment analysis of differentially expressed genes in top 20 KEGG pathways.</p

Significantly enriched KEGG pathways are shown along with their pathway ID, pathway name, the ratio of genes mapped to the pathway from all selected genes and the ratio of genes belonging to the pathway from all genes in all pathways, p-value for the enrichment and FDR.

Jens Boenigk (255300)
Daniela Beisser (584165)
Sonja Zimmermann (57880)
Christina Bock (584166)
Jurij Jakobi (584167)
Daniel Grabner (584168)
Lars Großmann (792417)
Sven Rahmann (2715)
Stephan Barcikowski (290218)
Bernd Sures (522025)

April 2014

Significantly enriched KEGG pathways are shown along with their pathway ID, pathway name, the rat...

Statistically enriched KEGG pathway.

Jun Xia (135528)
Chang-Rong Zhang (431281)
Shan Zhang (431282)
Fang-Fang Li (431283)
Ming-Guang Feng (233612)
Xiao-Wei Wang (157271)
Shu-Sheng Liu (67939)

July 2013

aThe number of genes mapped to each KEGG pathway in the whole transcriptome.bThe number of...

KEGG pathway enrichment of genes differentially expressed in T2 versus Ta and T1 stage bladder tumors.

Jonathan A. Ewald (279012)
Tracy M. Downs (279013)
Jeremy P. Cetnar (279014)
William A. Ricke (279015)

February 2013

(*)indicates KEGG pathways that involve mechanisms of signal transduction. P value represents the...

KEGG pathway enrichment of genes differentially expressed in T1–T4 staged bladder tumors versus Ta-stage tumors.

Jonathan A. Ewald (279012)
Tracy M. Downs (279013)
Jeremy P. Cetnar (279014)
William A. Ricke (279015)

February 2013

(*)indicates KEGG pathways that involve mechanisms of signal transduction. P value represents the...

The top KEGG pathways enriched in differentially expressed genes from SJS/TEN active lesions and ranked by FDR (FDR<0.25).

Paola Nicoletti (480885)
Mukesh Bansal (494487)
Celine Lefebvre (484956)
Paolo Guarnieri (220242)
Yufeng Shen (239573)
Itsik Pe’er (760914)
Andrea Califano (91999)
Aris Floratos (91995)

June 2015

The enrichment score is computed by DAVID on the 200 DEGs from Chung et al. Abbreviations: #GENES...

Significantly over represented KEGG pathway by the differentially expressed genes between 5 versus 3 dpf.

Jun Yin (94374)
Lisa Shine (107865)
Francis Raycroft (107867)
Sudhakar Deeti (107870)
Alison Reynolds (107872)
Kristin M. Ackerman (107875)
Antonino Glaviano (107878)
Sean O'Farrell (107882)
Olivia O'Leary (107885)
Claire Kilty (107889)
Ciaran Kennedy (107894)
Sarah McLoughlin (107899)
Megan Rice (107903)
Eileen Russell (107906)
Desmond G. Higgins (15541)
David R. Hyde (92151)
Breandan N. Kennedy (107911)

December 2012

Significantly over represented KEGG pathway by the differentially expressed genes between 5 versu...

KEGG pathway analysis of the differentially expressed proteins (top eight pathways).

Shujiang Zhang (5917007)
Chengcheng Zheng (5917010)
Shunheng Yao (5917013)
Zhonghui Wang (4089880)
Li Xu (108702)
Rongfu Yang (5917016)
Xiang Meng (383515)
Jianhui Wu (385334)
Li Zhou (54356)
Zuyue Sun (5917019)

October 2018

KEGG pathway analysis of the differentially expressed proteins (top eight pathways).</p

KEGG pathways significantly enriched in genes that are overexpressed in Dominant Red skin samples.

Ben Dorshorst (155377)
Corneliu Henegar (37667)
Xiaoping Liao (592112)
Markus Sällman Almén (279607)
Carl-Johan Rubin (77551)
Shosuke Ito (55670)
Kazumasa Wakamatsu (55669)
Paul Stothard (5814)
Brian Van Doormaal (749608)
Graham Plastow (174335)
Gregory S. Barsh (111121)
Leif Andersson (42573)

June 2015

KEGG pathways significantly enriched in genes that are overexpressed in Dominant Red skin samples...

The top 15 enriched KEGG pathway from the list of 3066 differentially expressed genes (DEGs).

Cunling Jia (3391982)
Xiaoyan Kong (3391979)
James E. Koltes (693905)
Xiao Gou (193279)
Shuli Yang (193229)
Dawei Yan (193244)
Shaoxiong Lu (193254)
Zehui Wei (503832)

December 2016

The top 15 enriched KEGG pathway from the list of 3066 differentially expressed genes (DEGs).</p

Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis of the differentially expressed genes in each comparison groups.

Batu K. Sharma-Kuinkel (242751)
Yurong Zhang (104163)
Qin Yan (281622)
Sun Hee Ahn (104154)
Vance G. Fowler Jr (104199)

April 2013

*: p-value is calculated by using Fischer’s exact test calculating the ratio of the pathway-assoc...

KEGG pathway enrichment analysis of differentially expressed genes between TTCS and TTE75.

Bo Liu (127343)
Yuhong Zhang (268338)
Wei Zhang (405)

March 2014

KEGG pathway enrichment analysis of differentially expressed genes between TTCS and TTE75.</p

Top IPA pathways enriched with differentially expressed genes and their corresponding Fisher's exact test p values.

Zhining Wen (226349)
Zhijun Wang (31218)
Steven Wang (354193)
Ranadheer Ravula (354194)
Lun Yang (165433)
Jun Xu (45543)
Charles Wang (242565)
Zhong Zuo (354195)
Moses S. S. Chow (354196)
Leming Shi (22343)
Ying Huang (53474)

February 2013

*The ratio is calculated by dividing the number of differentially expressed genes found in the pa...

KEGG pathway enrichment of genes differentially expressed RA and OA vs. NT samples.

Zhan-Chun Li (523391)
Jie Xiao (113647)
Jin-Liang Peng (523392)
Jian-Wei Chen (452345)
Tao Ma (88669)
Guang-Qi Cheng (523393)
Yu-Qi Dong (523394)
Wei-li Wang (523395)
Zu-De Liu (523396)

February 2014

The number of differentially expressed genes in a specific pathway, enriched gene ID and adjusted...

KEGG analysis of enriched pathways of differentially expressed genes between two groups.

Bao Yi (495702)
Liang Chen (73736)
Renna Sa (728624)
Ruqing Zhong (3112197)
Huan Xing (3112200)
Hongfu Zhang (230929)

September 2016

KEGG analysis of enriched pathways of differentially expressed genes between two groups.</p

Significant enrichment analysis of differentially expressed genes in top 20 KEGG pathways.

Daizhen Zhang (5728403)
Jun Liu (42548)
Tingting Qi (710630)
Baoming Ge (5728406)
Qiuning Liu (5728409)
Senhao Jiang (5728412)
Huabin Zhang (798548)
Zhengfei Wang (303878)
Ge Ding (5728415)
Boping Tang (322718)

September 2018

Significant enrichment analysis of differentially expressed genes in top 20 KEGG pathways.</p

Significantly enriched KEGG pathways are shown along with their pathway ID, pathway name, the ratio of genes mapped to the pathway from all selected genes and the ratio of genes belonging to the pathway from all genes in all pathways, p-value for the enrichment and FDR.

Jens Boenigk (255300)
Daniela Beisser (584165)
Sonja Zimmermann (57880)
Christina Bock (584166)
Jurij Jakobi (584167)
Daniel Grabner (584168)
Lars Großmann (792417)
Sven Rahmann (2715)
Stephan Barcikowski (290218)
Bernd Sures (522025)

April 2014

Significantly enriched KEGG pathways are shown along with their pathway ID, pathway name, the rat...

Statistically enriched KEGG pathway.

Jun Xia (135528)
Chang-Rong Zhang (431281)
Shan Zhang (431282)
Fang-Fang Li (431283)
Ming-Guang Feng (233612)
Xiao-Wei Wang (157271)
Shu-Sheng Liu (67939)

July 2013

aThe number of genes mapped to each KEGG pathway in the whole transcriptome.bThe number of...

KEGG pathway enrichment of genes differentially expressed in T2 versus Ta and T1 stage bladder tumors.

Jonathan A. Ewald (279012)
Tracy M. Downs (279013)
Jeremy P. Cetnar (279014)
William A. Ricke (279015)

February 2013

(*)indicates KEGG pathways that involve mechanisms of signal transduction. P value represents the...

KEGG pathway enrichment of genes differentially expressed in T1–T4 staged bladder tumors versus Ta-stage tumors.

Jonathan A. Ewald (279012)
Tracy M. Downs (279013)
Jeremy P. Cetnar (279014)
William A. Ricke (279015)

February 2013

(*)indicates KEGG pathways that involve mechanisms of signal transduction. P value represents the...

The top KEGG pathways enriched in differentially expressed genes from SJS/TEN active lesions and ranked by FDR (FDR<0.25).

Paola Nicoletti (480885)
Mukesh Bansal (494487)
Celine Lefebvre (484956)
Paolo Guarnieri (220242)
Yufeng Shen (239573)
Itsik Pe’er (760914)
Andrea Califano (91999)
Aris Floratos (91995)

June 2015

The enrichment score is computed by DAVID on the 200 DEGs from Chung et al. Abbreviations: #GENES...

Significantly over represented KEGG pathway by the differentially expressed genes between 5 versus 3 dpf.

Jun Yin (94374)
Lisa Shine (107865)
Francis Raycroft (107867)
Sudhakar Deeti (107870)
Alison Reynolds (107872)
Kristin M. Ackerman (107875)
Antonino Glaviano (107878)
Sean O'Farrell (107882)
Olivia O'Leary (107885)
Claire Kilty (107889)
Ciaran Kennedy (107894)
Sarah McLoughlin (107899)
Megan Rice (107903)
Eileen Russell (107906)
Desmond G. Higgins (15541)
David R. Hyde (92151)
Breandan N. Kennedy (107911)

December 2012

Significantly over represented KEGG pathway by the differentially expressed genes between 5 versu...

KEGG pathway analysis of the differentially expressed proteins (top eight pathways).

Shujiang Zhang (5917007)
Chengcheng Zheng (5917010)
Shunheng Yao (5917013)
Zhonghui Wang (4089880)
Li Xu (108702)
Rongfu Yang (5917016)
Xiang Meng (383515)
Jianhui Wu (385334)
Li Zhou (54356)
Zuyue Sun (5917019)

October 2018

KEGG pathway analysis of the differentially expressed proteins (top eight pathways).</p

KEGG pathways significantly enriched in genes that are overexpressed in Dominant Red skin samples.

Ben Dorshorst (155377)
Corneliu Henegar (37667)
Xiaoping Liao (592112)
Markus Sällman Almén (279607)
Carl-Johan Rubin (77551)
Shosuke Ito (55670)
Kazumasa Wakamatsu (55669)
Paul Stothard (5814)
Brian Van Doormaal (749608)
Graham Plastow (174335)
Gregory S. Barsh (111121)
Leif Andersson (42573)

June 2015

KEGG pathways significantly enriched in genes that are overexpressed in Dominant Red skin samples...

The top 15 enriched KEGG pathway from the list of 3066 differentially expressed genes (DEGs).

Cunling Jia (3391982)
Xiaoyan Kong (3391979)
James E. Koltes (693905)
Xiao Gou (193279)
Shuli Yang (193229)
Dawei Yan (193244)
Shaoxiong Lu (193254)
Zehui Wei (503832)

December 2016

The top 15 enriched KEGG pathway from the list of 3066 differentially expressed genes (DEGs).</p

Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis of the differentially expressed genes in each comparison groups.

Batu K. Sharma-Kuinkel (242751)
Yurong Zhang (104163)
Qin Yan (281622)
Sun Hee Ahn (104154)
Vance G. Fowler Jr (104199)

April 2013

*: p-value is calculated by using Fischer’s exact test calculating the ratio of the pathway-assoc...

KEGG pathway enrichment analysis of differentially expressed genes between TTCS and TTE75.

Bo Liu (127343)
Yuhong Zhang (268338)
Wei Zhang (405)

March 2014

KEGG pathway enrichment analysis of differentially expressed genes between TTCS and TTE75.</p

Top IPA pathways enriched with differentially expressed genes and their corresponding Fisher's exact test p values.

Zhining Wen (226349)
Zhijun Wang (31218)
Steven Wang (354193)
Ranadheer Ravula (354194)
Lun Yang (165433)
Jun Xu (45543)
Charles Wang (242565)
Zhong Zuo (354195)
Moses S. S. Chow (354196)
Leming Shi (22343)
Ying Huang (53474)

February 2013

*The ratio is calculated by dividing the number of differentially expressed genes found in the pa...

Top KEGG pathways enriched with differentially expressed genes and their corresponding Fisher's exact test <i>p</i> values.

Abstract

Extracted data

Top KEGG pathways enriched with differentially expressed genes and their corresponding Fisher's exact test <i>p</i> values.

Abstract

Extracted data

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