<p>This structure was obtained by docking the peptide from PDB entry 1T5W (AAYSDQATPLLL) into a grid potential model of the HLA-DRB1*0101 MHC structure from PDB entry 1KLU, which has a different peptide bound. The RMSD of the peptide backbone is 0.88 Å and the RMSD of the contacting residues is only 1.21 Å compared with the X-ray structure. The peptide docking solution is shown in red and the experimental peptide structure is shown in green.</p
<p>VDW value after the computational docking of peptides QNT-5 and QNT-Y into an MHC (DRβ1*04:01:01)...
<p>(A) RMSFs as calculated from MD simulations for MHC and peptide residues (inset). Only positions ...
MHC class 1 molecules hind peptides of 8-12 amino acids in the endoplasmic reticulum of mammalian ce...
<p>All HLA-DRB1*0101 peptide-MHC complexes were superimposed by aligning the backbones of the MHC pe...
In this article, we present a new technique for the rapid and precise docking of peptides to MHC cla...
Background: Identification of antigenic peptide epitopes is an essential prerequisite in T cell-base...
<p>Self-docking results are indicated by asterisks. The PDB ID for the MHC structure used in docking...
The class I major histocompatibility complex (MHC) is capable of binding peptides derived from intra...
The immune system is constantly protecting its host from the invasion of pathogens and the developme...
T cell receptors (TCRs) are immune proteins that specifically bind to antigenic molecules, which are...
UnrestrictedMajor histocompatibility complex (MHC) molecules are cell surface glycoproteins that bin...
<p>Cartoon representations of the docked poses of four novel MOMP-derived peptides (MdP1-4, a–d) and...
<p>Asterisks indicate self-docking results. The core segment is underlined in the peptide sequence.<...
An automated method for constructing 3D models of class II MHC structures that uses constraint logic...
<p>Structural comparison of overall structures of TCR-Vβ/huCollp261/HLA-DR4 complex models #36 (VB1<...
<p>VDW value after the computational docking of peptides QNT-5 and QNT-Y into an MHC (DRβ1*04:01:01)...
<p>(A) RMSFs as calculated from MD simulations for MHC and peptide residues (inset). Only positions ...
MHC class 1 molecules hind peptides of 8-12 amino acids in the endoplasmic reticulum of mammalian ce...
<p>All HLA-DRB1*0101 peptide-MHC complexes were superimposed by aligning the backbones of the MHC pe...
In this article, we present a new technique for the rapid and precise docking of peptides to MHC cla...
Background: Identification of antigenic peptide epitopes is an essential prerequisite in T cell-base...
<p>Self-docking results are indicated by asterisks. The PDB ID for the MHC structure used in docking...
The class I major histocompatibility complex (MHC) is capable of binding peptides derived from intra...
The immune system is constantly protecting its host from the invasion of pathogens and the developme...
T cell receptors (TCRs) are immune proteins that specifically bind to antigenic molecules, which are...
UnrestrictedMajor histocompatibility complex (MHC) molecules are cell surface glycoproteins that bin...
<p>Cartoon representations of the docked poses of four novel MOMP-derived peptides (MdP1-4, a–d) and...
<p>Asterisks indicate self-docking results. The core segment is underlined in the peptide sequence.<...
An automated method for constructing 3D models of class II MHC structures that uses constraint logic...
<p>Structural comparison of overall structures of TCR-Vβ/huCollp261/HLA-DR4 complex models #36 (VB1<...
<p>VDW value after the computational docking of peptides QNT-5 and QNT-Y into an MHC (DRβ1*04:01:01)...
<p>(A) RMSFs as calculated from MD simulations for MHC and peptide residues (inset). Only positions ...
MHC class 1 molecules hind peptides of 8-12 amino acids in the endoplasmic reticulum of mammalian ce...
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