<p>Top 10 of significant pathways identified by Ingenuity Pathway Analysis for the re-annotated differentially expressed mRNA dataset. Pathways in bold were found in the top 10 series of both the original and re-annotated datasets. Genes in bold and italics were only identified in the re-annotated dataset. Ratio Coverage = the number of genes from the data set that map to the pathway divided by the total number of genes that map to the canonical pathway is displayed (Ingenuity® Systems).</p
<p>The numbers of genes involved in the pathways are indicated in parentheses.</p
<p><a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0064067#pone-0064067-t002" ...
<p>The 65 significant genes (133 overlapped probes) which were differentially regulated in H99 compa...
<p>Top 10 of significant pathways identified by Ingenuity Pathway Analysis for the original differen...
<p>Top 10 of significant pathways identified by Ingenuity Pathway Analysis for the original whole mi...
<p>For this analysis, the 89 up regulated (average 2 fold changes) and 62 down regulated genes (aver...
<p>Pathway enrichment analysis of differentially expressed genes (Top ten enriched pathways are show...
<p>All genes that were significant at a p<0.05 level were subjected to pathway analysis (Ingenuity P...
<p>Top 10 significantly enriched pathways in differentially expressed genes at +3 d compared with −3...
<p>*Number of the differentially expressed genes in the category.</p><p>Canonical pathways enriched ...
<p><sup>1</sup>p-values were calculated with a Fisher-extract test contingency table by IPA.</p><p><...
<p>*Number of the differentially expressed genes in the category</p><p>Canonical pathways enriched w...
<p>(A) The pathway analysis indicated that a large number of differentially expressed genes belong t...
<p>All canonical pathways significantly associated with the dataset are depicted (p<0.001), after ap...
<p>Canonical pathways analysis identified the pathways from the Ingenuity Pathways Analysis library ...
<p>The numbers of genes involved in the pathways are indicated in parentheses.</p
<p><a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0064067#pone-0064067-t002" ...
<p>The 65 significant genes (133 overlapped probes) which were differentially regulated in H99 compa...
<p>Top 10 of significant pathways identified by Ingenuity Pathway Analysis for the original differen...
<p>Top 10 of significant pathways identified by Ingenuity Pathway Analysis for the original whole mi...
<p>For this analysis, the 89 up regulated (average 2 fold changes) and 62 down regulated genes (aver...
<p>Pathway enrichment analysis of differentially expressed genes (Top ten enriched pathways are show...
<p>All genes that were significant at a p<0.05 level were subjected to pathway analysis (Ingenuity P...
<p>Top 10 significantly enriched pathways in differentially expressed genes at +3 d compared with −3...
<p>*Number of the differentially expressed genes in the category.</p><p>Canonical pathways enriched ...
<p><sup>1</sup>p-values were calculated with a Fisher-extract test contingency table by IPA.</p><p><...
<p>*Number of the differentially expressed genes in the category</p><p>Canonical pathways enriched w...
<p>(A) The pathway analysis indicated that a large number of differentially expressed genes belong t...
<p>All canonical pathways significantly associated with the dataset are depicted (p<0.001), after ap...
<p>Canonical pathways analysis identified the pathways from the Ingenuity Pathways Analysis library ...
<p>The numbers of genes involved in the pathways are indicated in parentheses.</p
<p><a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0064067#pone-0064067-t002" ...
<p>The 65 significant genes (133 overlapped probes) which were differentially regulated in H99 compa...