<p>*BLAST e-value set was to <1×10<sup>−6</sup>. The protein-coding region annotations were taken from the ENSEMBL website (<a href="http://www.ensembl.org" target="_blank">www.ensembl.org</a>).</p
<p>A. Schematic of the type of overlap between TE and lncRNA sequences. Upper panel shows an idealiz...
The GENCODE Consortium aims to identify all gene features in the human genome using a combination of...
<p>(A) Percent similarity and (B) top blast hit species distribution during annotation of <i>L-LRK</...
The number of hits for each transcript biotype from Ensembl database calculated for each group of li...
<p>Unigenes annotated as known proteins with E-value threshold 9E<sup>−6</sup>. Total numbers of uni...
a<p>The number of proteins in COMBREX which have BLAST E values < 1×10<sup>−5</sup>, and alignment o...
(A) E-value distribution of Blastx hits for unigenes with a cut-off E-value of 1.0e-5. (B) Similarit...
<p>LncRNAs correspond to Gencode v13 (human) and protein coding genes to Refseq 57 (human, 20,848 ge...
<p>(A) similarity Distribution (B) and species distribution (C) of the BLAST matches of the transcri...
Sity around the peaks and the average cleavage intensity for that whole region, for all ENCODE regio...
1<p>BLAST E-value cutoff is e-5 for all hits reported in this table.</p>2<p><b>nr</b> = NCBI non-red...
<p>(<b>A</b>) E-value distribution of BLAST hits for the assembled unigenes with a cutoff of 1E-5. (...
Long non-coding RNAs (lncRNAs) constitute a large and diverse class of non-coding RNA genes. While s...
<p>(A) E-value distribution of top BLAST hits for each unigene (E-value of 1.0E-5). (B) Similarity d...
<p>Regions are genome, intergenic regions and exons. In the case of protein coding genes, exons incl...
<p>A. Schematic of the type of overlap between TE and lncRNA sequences. Upper panel shows an idealiz...
The GENCODE Consortium aims to identify all gene features in the human genome using a combination of...
<p>(A) Percent similarity and (B) top blast hit species distribution during annotation of <i>L-LRK</...
The number of hits for each transcript biotype from Ensembl database calculated for each group of li...
<p>Unigenes annotated as known proteins with E-value threshold 9E<sup>−6</sup>. Total numbers of uni...
a<p>The number of proteins in COMBREX which have BLAST E values < 1×10<sup>−5</sup>, and alignment o...
(A) E-value distribution of Blastx hits for unigenes with a cut-off E-value of 1.0e-5. (B) Similarit...
<p>LncRNAs correspond to Gencode v13 (human) and protein coding genes to Refseq 57 (human, 20,848 ge...
<p>(A) similarity Distribution (B) and species distribution (C) of the BLAST matches of the transcri...
Sity around the peaks and the average cleavage intensity for that whole region, for all ENCODE regio...
1<p>BLAST E-value cutoff is e-5 for all hits reported in this table.</p>2<p><b>nr</b> = NCBI non-red...
<p>(<b>A</b>) E-value distribution of BLAST hits for the assembled unigenes with a cutoff of 1E-5. (...
Long non-coding RNAs (lncRNAs) constitute a large and diverse class of non-coding RNA genes. While s...
<p>(A) E-value distribution of top BLAST hits for each unigene (E-value of 1.0E-5). (B) Similarity d...
<p>Regions are genome, intergenic regions and exons. In the case of protein coding genes, exons incl...
<p>A. Schematic of the type of overlap between TE and lncRNA sequences. Upper panel shows an idealiz...
The GENCODE Consortium aims to identify all gene features in the human genome using a combination of...
<p>(A) Percent similarity and (B) top blast hit species distribution during annotation of <i>L-LRK</...
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