Additional file 3: of Genetic mapping and comparative genomics to inform restoration enhancement and culture of southern flounder, Paralichthys lethostigma

Additional file 4: of A high-resolution genetic linkage map and QTL fine mapping for growth-related traits and sex in the Yangtze River common carp (Cyprinus carpio haematopterus)

Xiu Feng (4429315)
Xiaomu Yu (500657)
Beide Fu (214322)
Xinhua Wang (286425)
Haiyang Liu (445454)
Meixia Pang (5049500)
Jingou Tong (500658)

April 2018

Figure S3. Genomic synteny visualized using Oxford grids between linkage groups of C. c. haematopter...

Additional file 4: of Polygenic and sex specific architecture for two maturation traits in farmed Atlantic salmon

Amin Mohamed (6370595)
Klara Verbyla (3273828)
Hawlader Al-Mamun (3554969)
Sean McWilliam (9473)
Bradley Evans (3255312)
Harry King (3273834)
Peter Kube (3273837)
James Kijas (216935)

February 2019

All significant SNP identified for freshwater maturation, using both male and female fish. The table...

Additional file 5: of Polygenic sex determination in the cichlid fish Astatotilapia burtoni

Natalie Roberts (3462176)
Scott Juntti (3462191)
Kaitlin Coyle (3462194)
Bethany Dumont (3462182)
M. Stanley (3462185)
Allyson Ryan (3462188)
Russell Fernald (3433061)
Reade Roberts (3462179)

October 2016

Expanded summary table of association of genetic markers with sex in families, including genetic mar...

Additional file 4: of Genetic mapping and comparative genomics to inform restoration enhancement and culture of southern flounder, Paralichthys lethostigma

Shannon OâLeary (4877038)
Christopher Hollenbeck (7582)
Robert Vega (4877035)
John Gold (3246342)
David Portnoy (3246351)

February 2018

Comparison of number of loci and linkage group length (in parentheses) for corresponding linkage gro...

Additional file 2: of Genetic mapping and comparative genomics to inform restoration enhancement and culture of southern flounder, Paralichthys lethostigma

Shannon OâLeary (4877038)
Christopher Hollenbeck (7582)
Robert Vega (4877035)
John Gold (3246342)
David Portnoy (3246351)

February 2018

Filtering parameters for each filtering step, and number of SNPs and contigs remaining for Families ...

Additional file 6: of Genetic mapping and comparative genomics to inform restoration enhancement and culture of southern flounder, Paralichthys lethostigma

Shannon OâLeary (4877038)
Christopher Hollenbeck (7582)
Robert Vega (4877035)
John Gold (3246342)
David Portnoy (3246351)

February 2018

Comparative view of location of syntenic blocks on consensus linkage map of southern flounder and fu...

Additional file 9: of Genetic mapping and comparative genomics to inform restoration enhancement and culture of southern flounder, Paralichthys lethostigma

Shannon OâLeary (4877038)
Christopher Hollenbeck (7582)
Robert Vega (4877035)
John Gold (3246342)
David Portnoy (3246351)

February 2018

Comparative view of location of syntenic blocks on consensus linkage map of southern flounder and gr...

Additional file 5: of Genetic mapping and comparative genomics to inform restoration enhancement and culture of southern flounder, Paralichthys lethostigma

Shannon OâLeary (4877038)
Christopher Hollenbeck (7582)
Robert Vega (4877035)
John Gold (3246342)
David Portnoy (3246351)

February 2018

Comparative view of location of syntenic blocks on consensus linkage map of southern flounder and Eu...

Additional file 8: of Genetic mapping and comparative genomics to inform restoration enhancement and culture of southern flounder, Paralichthys lethostigma

Shannon OâLeary (4877038)
Christopher Hollenbeck (7582)
Robert Vega (4877035)
John Gold (3246342)
David Portnoy (3246351)

February 2018

Comparative view of location of syntenic blocks on consensus linkage map of southern flounder and ni...

Genetic mapping and comparative genomics to inform restoration enhancement and culture of southern flounder, Paralichthys lethostigma (datasets and analysis files)

O’Leary, Shannon J.
Hollenbeck, Christopher Michael
Vega, Robert R.
Gold, John R.
Portnoy, David S.
School of Biology

January 2018

filtered SNP data set (VCF Format), SNP haplotype data set (mapmaker, onemap file formats), and redu...

Genetic mapping and comparative genomics to inform restoration enhancement and culture of southern flounder, Paralichthys lethostigma (gene sequence dataset)

O’Leary, Shannon J.
Hollenbeck, Christopher Michael
Vega, Robert R.
Gold, John R.
Portnoy, David S.
School of Biology

September 2018

Raw, demultiplexed sequence reads are available from NCBI’s Short Read Archive, BioProject PRJNA4069...

Additional file 3: of A high-resolution genetic linkage map and QTL fine mapping for growth-related traits and sex in the Yangtze River common carp (Cyprinus carpio haematopterus)

Xiu Feng (4429315)
Xiaomu Yu (500657)
Beide Fu (214322)
Xinhua Wang (286425)
Haiyang Liu (445454)
Meixia Pang (5049500)
Jingou Tong (500658)

April 2018

Figure S2. Genomic synteny visualized using Oxford grids between linkage groups of C. c. haematopter...

Genetic mapping and comparative genomics to inform restoration enhancement and culture of southern flounder, Paralichthys lethostigma

Shannon J. O’Leary
Christopher M. Hollenbeck
Robert R. Vega
John R. Gold
David S. Portnoy

February 2018

Abstract Background Southern flounder, Paralichthys lethostigma, historically support a substantial ...

Additional file 1: of A high-resolution genetic linkage map and QTL fine mapping for growth-related traits and sex in the Yangtze River common carp (Cyprinus carpio haematopterus)

Xiu Feng (4429315)
Xiaomu Yu (500657)
Beide Fu (214322)
Xinhua Wang (286425)
Haiyang Liu (445454)
Meixia Pang (5049500)
Jingou Tong (500658)

April 2018

Table S1. Information of markers located in the high-resolution genetic linkage map of the Yangtze R...

Additional file 1: Table S1. of Construction of high-resolution recombination maps in Asian seabass

Le Wang (165105)
Bin Bai (651428)
Peng Liu (120506)
Shu Huang (1817500)
Zi Wan (503881)
Elaine Chua (3357200)
Baoqing Ye (3626819)
Gen Yue (3262644)

January 2017

Summary statistics of 24 linkage groups of sex-specific genetic maps for three families of Asian sea...

Additional file 4: of A high-resolution genetic linkage map and QTL fine mapping for growth-related traits and sex in the Yangtze River common carp (Cyprinus carpio haematopterus)

Xiu Feng (4429315)
Xiaomu Yu (500657)
Beide Fu (214322)
Xinhua Wang (286425)
Haiyang Liu (445454)
Meixia Pang (5049500)
Jingou Tong (500658)

April 2018

Figure S3. Genomic synteny visualized using Oxford grids between linkage groups of C. c. haematopter...

Additional file 4: of Polygenic and sex specific architecture for two maturation traits in farmed Atlantic salmon

Amin Mohamed (6370595)
Klara Verbyla (3273828)
Hawlader Al-Mamun (3554969)
Sean McWilliam (9473)
Bradley Evans (3255312)
Harry King (3273834)
Peter Kube (3273837)
James Kijas (216935)

February 2019

All significant SNP identified for freshwater maturation, using both male and female fish. The table...

Additional file 5: of Polygenic sex determination in the cichlid fish Astatotilapia burtoni

Natalie Roberts (3462176)
Scott Juntti (3462191)
Kaitlin Coyle (3462194)
Bethany Dumont (3462182)
M. Stanley (3462185)
Allyson Ryan (3462188)
Russell Fernald (3433061)
Reade Roberts (3462179)

October 2016

Expanded summary table of association of genetic markers with sex in families, including genetic mar...

Additional file 4: of Genetic mapping and comparative genomics to inform restoration enhancement and culture of southern flounder, Paralichthys lethostigma

Shannon OâLeary (4877038)
Christopher Hollenbeck (7582)
Robert Vega (4877035)
John Gold (3246342)
David Portnoy (3246351)

February 2018

Comparison of number of loci and linkage group length (in parentheses) for corresponding linkage gro...

Additional file 2: of Genetic mapping and comparative genomics to inform restoration enhancement and culture of southern flounder, Paralichthys lethostigma

Shannon OâLeary (4877038)
Christopher Hollenbeck (7582)
Robert Vega (4877035)
John Gold (3246342)
David Portnoy (3246351)

February 2018

Filtering parameters for each filtering step, and number of SNPs and contigs remaining for Families ...

Additional file 6: of Genetic mapping and comparative genomics to inform restoration enhancement and culture of southern flounder, Paralichthys lethostigma

Shannon OâLeary (4877038)
Christopher Hollenbeck (7582)
Robert Vega (4877035)
John Gold (3246342)
David Portnoy (3246351)

February 2018

Comparative view of location of syntenic blocks on consensus linkage map of southern flounder and fu...

Additional file 9: of Genetic mapping and comparative genomics to inform restoration enhancement and culture of southern flounder, Paralichthys lethostigma

Shannon OâLeary (4877038)
Christopher Hollenbeck (7582)
Robert Vega (4877035)
John Gold (3246342)
David Portnoy (3246351)

February 2018

Comparative view of location of syntenic blocks on consensus linkage map of southern flounder and gr...

Additional file 5: of Genetic mapping and comparative genomics to inform restoration enhancement and culture of southern flounder, Paralichthys lethostigma

Shannon OâLeary (4877038)
Christopher Hollenbeck (7582)
Robert Vega (4877035)
John Gold (3246342)
David Portnoy (3246351)

February 2018

Comparative view of location of syntenic blocks on consensus linkage map of southern flounder and Eu...

Additional file 8: of Genetic mapping and comparative genomics to inform restoration enhancement and culture of southern flounder, Paralichthys lethostigma

Shannon OâLeary (4877038)
Christopher Hollenbeck (7582)
Robert Vega (4877035)
John Gold (3246342)
David Portnoy (3246351)

February 2018

Comparative view of location of syntenic blocks on consensus linkage map of southern flounder and ni...

Genetic mapping and comparative genomics to inform restoration enhancement and culture of southern flounder, Paralichthys lethostigma (datasets and analysis files)

O’Leary, Shannon J.
Hollenbeck, Christopher Michael
Vega, Robert R.
Gold, John R.
Portnoy, David S.
School of Biology

January 2018

filtered SNP data set (VCF Format), SNP haplotype data set (mapmaker, onemap file formats), and redu...

Genetic mapping and comparative genomics to inform restoration enhancement and culture of southern flounder, Paralichthys lethostigma (gene sequence dataset)

O’Leary, Shannon J.
Hollenbeck, Christopher Michael
Vega, Robert R.
Gold, John R.
Portnoy, David S.
School of Biology

September 2018

Raw, demultiplexed sequence reads are available from NCBI’s Short Read Archive, BioProject PRJNA4069...

Additional file 3: of A high-resolution genetic linkage map and QTL fine mapping for growth-related traits and sex in the Yangtze River common carp (Cyprinus carpio haematopterus)

Xiu Feng (4429315)
Xiaomu Yu (500657)
Beide Fu (214322)
Xinhua Wang (286425)
Haiyang Liu (445454)
Meixia Pang (5049500)
Jingou Tong (500658)

April 2018

Figure S2. Genomic synteny visualized using Oxford grids between linkage groups of C. c. haematopter...

Genetic mapping and comparative genomics to inform restoration enhancement and culture of southern flounder, Paralichthys lethostigma

Shannon J. O’Leary
Christopher M. Hollenbeck
Robert R. Vega
John R. Gold
David S. Portnoy

February 2018

Abstract Background Southern flounder, Paralichthys lethostigma, historically support a substantial ...

Additional file 1: of A high-resolution genetic linkage map and QTL fine mapping for growth-related traits and sex in the Yangtze River common carp (Cyprinus carpio haematopterus)

Xiu Feng (4429315)
Xiaomu Yu (500657)
Beide Fu (214322)
Xinhua Wang (286425)
Haiyang Liu (445454)
Meixia Pang (5049500)
Jingou Tong (500658)

April 2018

Table S1. Information of markers located in the high-resolution genetic linkage map of the Yangtze R...

Additional file 1: Table S1. of Construction of high-resolution recombination maps in Asian seabass

Le Wang (165105)
Bin Bai (651428)
Peng Liu (120506)
Shu Huang (1817500)
Zi Wan (503881)
Elaine Chua (3357200)
Baoqing Ye (3626819)
Gen Yue (3262644)

January 2017

Summary statistics of 24 linkage groups of sex-specific genetic maps for three families of Asian sea...

Additional file 4: of A high-resolution genetic linkage map and QTL fine mapping for growth-related traits and sex in the Yangtze River common carp (Cyprinus carpio haematopterus)

Xiu Feng (4429315)
Xiaomu Yu (500657)
Beide Fu (214322)
Xinhua Wang (286425)
Haiyang Liu (445454)
Meixia Pang (5049500)
Jingou Tong (500658)

April 2018

Figure S3. Genomic synteny visualized using Oxford grids between linkage groups of C. c. haematopter...

Additional file 4: of Polygenic and sex specific architecture for two maturation traits in farmed Atlantic salmon

Amin Mohamed (6370595)
Klara Verbyla (3273828)
Hawlader Al-Mamun (3554969)
Sean McWilliam (9473)
Bradley Evans (3255312)
Harry King (3273834)
Peter Kube (3273837)
James Kijas (216935)

February 2019

All significant SNP identified for freshwater maturation, using both male and female fish. The table...

Additional file 5: of Polygenic sex determination in the cichlid fish Astatotilapia burtoni

Natalie Roberts (3462176)
Scott Juntti (3462191)
Kaitlin Coyle (3462194)
Bethany Dumont (3462182)
M. Stanley (3462185)
Allyson Ryan (3462188)
Russell Fernald (3433061)
Reade Roberts (3462179)

October 2016

Expanded summary table of association of genetic markers with sex in families, including genetic mar...

Additional file 3: of Genetic mapping and comparative genomics to inform restoration enhancement and culture of southern flounder, Paralichthys lethostigma

Abstract

Extracted data

Additional file 3: of Genetic mapping and comparative genomics to inform restoration enhancement and culture of southern flounder, Paralichthys lethostigma

Abstract

Extracted data

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