<p>Comparison of various homology model quality criteria against structure accuracy as measured by C<sub>α</sub>, root mean squared deviation (RMSD) for the α-spectrin SH3 domain (PDB ID: 1SHG): sequence identity (a), DFIRE-AA score (b), and GB22 energy (c).</p
<p>The root mean squared differences (rmsd) in Å between repeat domain structures are reported. The ...
<p>The GDC-all score is similar to GDT-ha but also includes side-chain atoms in its assessment. Perc...
Homology-based modeling, or more simply homology modeling, is becoming increasingly important. Model...
(A) Three-dimensional predicted structure for SoCMO2 after 200 ns of MD simulations is shown as blue...
<p>Sequences alignment and homology modeling were carried out with sequences for PGT121-137 heavy an...
<p><b>Copyright information:</b></p><p>Taken from "Improving model construction of profile HMMs for ...
*<p>Manually determined C alphas of secondary structure correspond to human TBC1D1 residues 18–56, 6...
<p>Comparison of the stereochemical quality of homology modeled HCTR1, HCTR2 and closest structural ...
<p>The performance of the method (Y axis), measured as the percentage of protein structures in which...
a<p>Reference alignments generated by the structure alignment program, SKA. The number of models is ...
In the absence of experimental structures, comparative modeling continues to be the chosen method fo...
Contains fulltext : 88325.pdf (publisher's version ) (Closed access)Homology model...
The quality scores reported by the GS20 software correlate with decreased confidence in calling the ...
<p>The models (white ribbons) are superimposed on the target native structures (gray ribbons). (A) G...
The accuracy of comparative models of proteins is addressed here. A set of 12 732 single-template mo...
<p>The root mean squared differences (rmsd) in Å between repeat domain structures are reported. The ...
<p>The GDC-all score is similar to GDT-ha but also includes side-chain atoms in its assessment. Perc...
Homology-based modeling, or more simply homology modeling, is becoming increasingly important. Model...
(A) Three-dimensional predicted structure for SoCMO2 after 200 ns of MD simulations is shown as blue...
<p>Sequences alignment and homology modeling were carried out with sequences for PGT121-137 heavy an...
<p><b>Copyright information:</b></p><p>Taken from "Improving model construction of profile HMMs for ...
*<p>Manually determined C alphas of secondary structure correspond to human TBC1D1 residues 18–56, 6...
<p>Comparison of the stereochemical quality of homology modeled HCTR1, HCTR2 and closest structural ...
<p>The performance of the method (Y axis), measured as the percentage of protein structures in which...
a<p>Reference alignments generated by the structure alignment program, SKA. The number of models is ...
In the absence of experimental structures, comparative modeling continues to be the chosen method fo...
Contains fulltext : 88325.pdf (publisher's version ) (Closed access)Homology model...
The quality scores reported by the GS20 software correlate with decreased confidence in calling the ...
<p>The models (white ribbons) are superimposed on the target native structures (gray ribbons). (A) G...
The accuracy of comparative models of proteins is addressed here. A set of 12 732 single-template mo...
<p>The root mean squared differences (rmsd) in Å between repeat domain structures are reported. The ...
<p>The GDC-all score is similar to GDT-ha but also includes side-chain atoms in its assessment. Perc...
Homology-based modeling, or more simply homology modeling, is becoming increasingly important. Model...