<p>The native structure is indicated by a blue circled asterisk and the SDU2 prediction by a red square.</p
<p>(A) Plot of the Backbone RMSD of TAZ2 along the simulation. The MD was fitted against the average...
<p>RMSD graph shows the deviation of the backbone in the native (blue) and the mutant (green) form o...
<p>The RMSD was calculated over the whole simulation process to check the stability of the unmodifie...
<p>The native structure is indicated by a blue circled asterisk and the SDU2 prediction by a red squ...
<p>The rigid body prediction before SDU2 refinement is indicated by a black circle and the SDU2 pred...
<p>(A) The RMSD for backbone atoms of the protein. (B) The potential energy of the system. These plo...
<p>The points in the plots represent Rosetta generated protein structure models. In column 1 and 3, ...
<p>(Insets A and B) shows the relative structures at the point of RMSD jump. (b) MGMT residue RMSF a...
<p>Panel A : RMSD of MalE2 along the simulation, with respect to the starting structures at pH 4.0 (...
<p>The red point indicates the energy minimised crystal structure loop and the blue point indicates ...
<p>Eukaryotic proteases (3EST, 1TON, 3RP2, 5CHA) are in blue, prokaryotic (1SGT, 2SGA, 3SGB, 2ALP) i...
<p>Scatter plot of differentiating ETs to all ETs vs. protein length, mean RMSD of native models (me...
A. Clustering analysis for the predicted structures of the SUMO2/RBD complex using mutual Q (includi...
<p>For the complexes, the corresponding ligand RMSD-values are depicted as green curves.</p
<p>In (A), RMSD values from the whole construct (NS3<sub>PRO</sub> F, black line) were compared with...
<p>(A) Plot of the Backbone RMSD of TAZ2 along the simulation. The MD was fitted against the average...
<p>RMSD graph shows the deviation of the backbone in the native (blue) and the mutant (green) form o...
<p>The RMSD was calculated over the whole simulation process to check the stability of the unmodifie...
<p>The native structure is indicated by a blue circled asterisk and the SDU2 prediction by a red squ...
<p>The rigid body prediction before SDU2 refinement is indicated by a black circle and the SDU2 pred...
<p>(A) The RMSD for backbone atoms of the protein. (B) The potential energy of the system. These plo...
<p>The points in the plots represent Rosetta generated protein structure models. In column 1 and 3, ...
<p>(Insets A and B) shows the relative structures at the point of RMSD jump. (b) MGMT residue RMSF a...
<p>Panel A : RMSD of MalE2 along the simulation, with respect to the starting structures at pH 4.0 (...
<p>The red point indicates the energy minimised crystal structure loop and the blue point indicates ...
<p>Eukaryotic proteases (3EST, 1TON, 3RP2, 5CHA) are in blue, prokaryotic (1SGT, 2SGA, 3SGB, 2ALP) i...
<p>Scatter plot of differentiating ETs to all ETs vs. protein length, mean RMSD of native models (me...
A. Clustering analysis for the predicted structures of the SUMO2/RBD complex using mutual Q (includi...
<p>For the complexes, the corresponding ligand RMSD-values are depicted as green curves.</p
<p>In (A), RMSD values from the whole construct (NS3<sub>PRO</sub> F, black line) were compared with...
<p>(A) Plot of the Backbone RMSD of TAZ2 along the simulation. The MD was fitted against the average...
<p>RMSD graph shows the deviation of the backbone in the native (blue) and the mutant (green) form o...
<p>The RMSD was calculated over the whole simulation process to check the stability of the unmodifie...
DOI
Add to ORKG