<p>The lines intersect with the actual value at for method (<i>a</i>) (i.e. of all random networks generated had 13 or fewer dynamically positive cycles), for method (<i>b</i>), and for method (<i>c</i>).</p
<p>Numbers in the parenthesis show the size of the motif for which the experiments are conducted (th...
<p><i>N</i> = 200, , , and , the plot includes completely random configurations (black points), the ...
<p>Box plots of the distributions of persistences (panel ), births (panel ) and lengths (panel ) ...
<p>Observed modularity and 95% confidence interval from randomly assembled networks for each sample ...
<p>Under each scenario, 25 datasets were simulated. Lighter lines indicate the ROC curve for a parti...
Summary statistics of the network with positive edges (positive network) and the network with negati...
<p>The average percent identity is the fraction of links the randomized network had in common with t...
<p><i>S</i> is the fraction of vertices in the largest connected component. <i>d</i> is the average ...
<p>The networks were extracted from KEGG via random walks. The plot shows the effect of size of netw...
(a) shows the result for different subgraph sizes given the number of subgraphs m = 10; (b) shows th...
<p>Nodes are targeted by degree (A), leverage (B), betweenness (C), and eigenvector centrality (D), ...
<p>The results shown in the box plots are the overall average of the networks over 1260 test cases. ...
<p>Effect of modifying the tuned values of <i>η</i> by a random fraction of 5% of the value used in ...
<p> Panels A and B show two important network parameters for five different network sizes over the n...
<p>A. Boxplots of the sign of autoregulation (<i>p</i> in <a href="http://www.ploscompbiol.org/artic...
<p>Numbers in the parenthesis show the size of the motif for which the experiments are conducted (th...
<p><i>N</i> = 200, , , and , the plot includes completely random configurations (black points), the ...
<p>Box plots of the distributions of persistences (panel ), births (panel ) and lengths (panel ) ...
<p>Observed modularity and 95% confidence interval from randomly assembled networks for each sample ...
<p>Under each scenario, 25 datasets were simulated. Lighter lines indicate the ROC curve for a parti...
Summary statistics of the network with positive edges (positive network) and the network with negati...
<p>The average percent identity is the fraction of links the randomized network had in common with t...
<p><i>S</i> is the fraction of vertices in the largest connected component. <i>d</i> is the average ...
<p>The networks were extracted from KEGG via random walks. The plot shows the effect of size of netw...
(a) shows the result for different subgraph sizes given the number of subgraphs m = 10; (b) shows th...
<p>Nodes are targeted by degree (A), leverage (B), betweenness (C), and eigenvector centrality (D), ...
<p>The results shown in the box plots are the overall average of the networks over 1260 test cases. ...
<p>Effect of modifying the tuned values of <i>η</i> by a random fraction of 5% of the value used in ...
<p> Panels A and B show two important network parameters for five different network sizes over the n...
<p>A. Boxplots of the sign of autoregulation (<i>p</i> in <a href="http://www.ploscompbiol.org/artic...
<p>Numbers in the parenthesis show the size of the motif for which the experiments are conducted (th...
<p><i>N</i> = 200, , , and , the plot includes completely random configurations (black points), the ...
<p>Box plots of the distributions of persistences (panel ), births (panel ) and lengths (panel ) ...