ROMs of outer dimers in simulation of POD+CC complex (see right side of <b>Figure 6</b>).

<p>(A) atomistic simulation; (B) CG simulation with ELNEDYN network (spring constant: 200 kJ mol⁻¹nm⁻²); (C) CG simulation with IDEN elastic network. Projections of the <b><i>X</i></b><i> (left panels), </i><b><i>Y</i></b><i> (middle panels), </i><b><i>Z</i></b><i> (right panels)</i>-axis of capsomer 2 on the <i>xy</i> plane when capsomer 1 is aligned to the <i>z</i> axis (see <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0060582#s4" target="_blank">Methods</a> section). Coloring according to the normalized probability of finding these relative orientations. The blue circles are drawn with a radius of the longest internal axis of the capsomer.