<p>Assembled sequence reads were classified into the 25 COG categories designated in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0061928#pone-0061928-g005" target="_blank">Figure 5</a> and their relative abundances for each metagenome were estimated considering the respective total number of protein coding sequences with function prediction. The public metagenomes included in the comparison are benzene-degrading bioreactor, biofuel reactor, compost minireactor, termite hindgut, poplar biomass bioreactor, lake sediment and soil rain forest, whose features are listed in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0061928#pone.0061928.s008" target="_blank">Table S5</a>. Asterisks indicate sta...
To assess the potential of protein function prediction in environmental genomics data, we analyzed s...
Abstract Background Metagenomics, sequence analyses of genomic DNA isolated directly from the enviro...
Background: The function of many genes is still not known even in model organisms. An increasing ava...
<p>Assembled sequence reads were classified into the 25 COG functional categories, and their relativ...
<p>793758 and 680461 annotated assembled sequences of ZC1 and ZC2 metagenomes were respectively clas...
<p>Each position represents the percentage of sequences reads within a GC percentage range. Sources:...
Additional file 6. Functional characterization of the GBs according to COG. (“COG_gene_numb” workshe...
<p>Metagenomes were annotated using the COG database. Reads were assigned to standard COG functional...
Bacteria and Archaea represent the invisible majority of living things on Earth with an estimated nu...
<p>a) <b>Correlations between expected and actual COG abundance.</b> Dotplots compare the expected a...
Hanreich A, Schimpf U, Zakrzewski M, et al. Metagenome and metaproteome analyses of microbial commun...
Hydrocarbon compounds can be biodegraded by anaerobic microorganisms to form methane through an ener...
This repository contains files that describe the ~36 million contigs that were assembled from 1,782 ...
<p>This is a plot of the raw data pulled down from the JGI websites on bacterial and archaeal genome...
Hydrocarbon compounds can be biodegraded by anaerobic microorganisms to form methane through an ener...
To assess the potential of protein function prediction in environmental genomics data, we analyzed s...
Abstract Background Metagenomics, sequence analyses of genomic DNA isolated directly from the enviro...
Background: The function of many genes is still not known even in model organisms. An increasing ava...
<p>Assembled sequence reads were classified into the 25 COG functional categories, and their relativ...
<p>793758 and 680461 annotated assembled sequences of ZC1 and ZC2 metagenomes were respectively clas...
<p>Each position represents the percentage of sequences reads within a GC percentage range. Sources:...
Additional file 6. Functional characterization of the GBs according to COG. (“COG_gene_numb” workshe...
<p>Metagenomes were annotated using the COG database. Reads were assigned to standard COG functional...
Bacteria and Archaea represent the invisible majority of living things on Earth with an estimated nu...
<p>a) <b>Correlations between expected and actual COG abundance.</b> Dotplots compare the expected a...
Hanreich A, Schimpf U, Zakrzewski M, et al. Metagenome and metaproteome analyses of microbial commun...
Hydrocarbon compounds can be biodegraded by anaerobic microorganisms to form methane through an ener...
This repository contains files that describe the ~36 million contigs that were assembled from 1,782 ...
<p>This is a plot of the raw data pulled down from the JGI websites on bacterial and archaeal genome...
Hydrocarbon compounds can be biodegraded by anaerobic microorganisms to form methane through an ener...
To assess the potential of protein function prediction in environmental genomics data, we analyzed s...
Abstract Background Metagenomics, sequence analyses of genomic DNA isolated directly from the enviro...
Background: The function of many genes is still not known even in model organisms. An increasing ava...