<p>(<b>A</b>) Transmembrane profile of <i>N. meningitidis</i> PglL with the regions identified by the PglL_A, PglL_B and Wzy_C hidden Markov models indicated by red, green and blue lines and highly conserved amino acids coloured in red and orange. (<b>B</b>) The PglL protein Phobius transmembrane helix prediction with predicted transmembrane regions represented by dashed-lines. (<b>C</b>) CLUSTALX plot of sequence conservation of CLUSTALW alignment of the putative PglL proteins. (<b>D</b>) Regions identified by the PglL_A, PglL_B and Wzy_C hidden Markov models indicated by red, green and blue boxes respectively.</p
A. Alignment of P. berghei with recently characterized PhLP-3 homologs of different species using th...
<p>(A) Schematic representation of the predicted (sub)domains (1A, 1B, 2A and 2B) and motifs (I, Ia ...
<p>Sample plots of the topological map (generated by TMHMM predictions) of two representative protei...
Transmembrane proteins make up a large and important class of proteins. About 20% of all genes encod...
<p>The <i>N</i>. <i>meningitidis</i> MC58 PilG hypothetical structure generated by the SAM-T06 model...
<p>The TMHMM web tools of the Center for Biological Sequence Analysis, Technical University of Denma...
An inherent problem in transmembrane protein topology prediction and signal peptide prediction is th...
<p>The diagram shows the nine membrane-spanning regions as vertical cylinders, and the cytoplasmic a...
This paper describes a new modeling method for the prediction of transmembrane protein topology. The...
Transmembrane helix (TMH) topology prediction is becoming a focal problem in bioinformatics because ...
In analysis of structural information for transmembrane (TM) proteins it is ideal to work with a thr...
<p>The conserved motifs in the MeNAC proteins were identified by MEME. Grey lines represent the non-...
<p>(A) Ribbon diagram of PMM/PGM from <i>P. aeruginosa</i> (PDB ID 1K2Y) with a semi-transparent sur...
<p>(<b>A</b>) Aligned amino acid sequences of representative PNC homologues are displayed in functio...
<p>Helices are shown in red, the termini and connecting loops in black. Arrows indicate the approxim...
A. Alignment of P. berghei with recently characterized PhLP-3 homologs of different species using th...
<p>(A) Schematic representation of the predicted (sub)domains (1A, 1B, 2A and 2B) and motifs (I, Ia ...
<p>Sample plots of the topological map (generated by TMHMM predictions) of two representative protei...
Transmembrane proteins make up a large and important class of proteins. About 20% of all genes encod...
<p>The <i>N</i>. <i>meningitidis</i> MC58 PilG hypothetical structure generated by the SAM-T06 model...
<p>The TMHMM web tools of the Center for Biological Sequence Analysis, Technical University of Denma...
An inherent problem in transmembrane protein topology prediction and signal peptide prediction is th...
<p>The diagram shows the nine membrane-spanning regions as vertical cylinders, and the cytoplasmic a...
This paper describes a new modeling method for the prediction of transmembrane protein topology. The...
Transmembrane helix (TMH) topology prediction is becoming a focal problem in bioinformatics because ...
In analysis of structural information for transmembrane (TM) proteins it is ideal to work with a thr...
<p>The conserved motifs in the MeNAC proteins were identified by MEME. Grey lines represent the non-...
<p>(A) Ribbon diagram of PMM/PGM from <i>P. aeruginosa</i> (PDB ID 1K2Y) with a semi-transparent sur...
<p>(<b>A</b>) Aligned amino acid sequences of representative PNC homologues are displayed in functio...
<p>Helices are shown in red, the termini and connecting loops in black. Arrows indicate the approxim...
A. Alignment of P. berghei with recently characterized PhLP-3 homologs of different species using th...
<p>(A) Schematic representation of the predicted (sub)domains (1A, 1B, 2A and 2B) and motifs (I, Ia ...
<p>Sample plots of the topological map (generated by TMHMM predictions) of two representative protei...