The numbers of nucleotide differences of the 150 core genes among A. actinomycetemcomitans strains and A. aphrophilus NJ8700.

Number of SNPs distinguishing pairs of strains identified in 3,453,192 bp.

Angelo Mazzaglia (166038)
David J. Studholme (57620)
Maria C. Taratufolo (166040)
Rongman Cai (166042)
Nalvo F. Almeida (166044)
Tokia Goodman (166046)
David S. Guttman (131322)
Boris A. Vinatzer (166050)
Giorgio M. Balestra (166054)

May 2012

Number of SNPs distinguishing pairs of strains identified in 3,453,192 bp.</p

Nucleotide (nt265–285) and Amino Acid (aa89–95) Sequences in the NS5A Region of 647 Genotype 1b HCV Strains in the Database.

Yoshihito Uchida (661242)
Jun-ichi Kouyama (661243)
Kayoko Naiki (661244)
Satoshi Mochida (156566)

November 2014

The figures in the lower panel denote the number of HCV strains showing each nucleotide (nt273, 2...

Nucleotide differences and percentages of homology between the new xylose-fermenting yeasts and the type cultures of closest relatives, S. shehatae or S. stipitis.

Hector Urbina (319474)
Meredith Blackwell (248070)

February 2013

Nucleotide differences and percentages of homology between the new xylose-fermenting yeasts and t...

Cladogram of 18 A. actinomycetemcomitans strains and A. aphrophilus NJ8700 based on 150 core genes.

Ruoxing Sun (422924)
Weerayuth Kittichotirat (213325)
Justin Wang (422925)
Minnie Jan (422926)
Weizhen Chen (422927)
Sirkka Asikainen (213334)
Roger Bumgarner (158099)
Casey Chen (42121)

June 2013

In the cladogram, the paired strains (bracketed by red boxes) were more closely related to each o...

Distribution of the percentage of conserved nucleotides among the 1759 core genes of the 76 S. sciuri strains analyzed in this study.

Joana Rolo (167680)
Peder Worning (407329)
Jesper Boye Nielsen (3916208)
Rita Sobral (3916205)
Rory Bowden (179995)
Ons Bouchami (167699)
Peter Damborg (3916202)
Luca Guardabassi (298890)
Vincent Perreten (733413)
Henrik Westh (232180)
Alexander Tomasz (1968)
Hermínia de Lencastre (1970)
Maria Miragaia (167683)

April 2017

The conservation percentage of mecA1 is shown in red (A). Number of discontinuities in the...

Difference in the number of genes in different P450 families between the CSM transcriptome and genomes of other species.

Zhifeng Xu (564780)
Wenyi Zhu (564781)
Yanchao Liu (564782)
Xing Liu (221084)
Qiushuang Chen (564783)
Miao Peng (290897)
Xiangzun Wang (564784)
Guangmao Shen (564785)
Lin He (102807)

May 2014

Difference in the number of genes in different P450 families between the CSM transcriptome and ge...

Number of single nucleotide polymorphisms differences between each strain.

Roberto Colangeli (31628)
Vic L. Arcus (533377)
Ray T. Cursons (533378)
Ali Ruthe (533379)
Noel Karalus (533380)
Kathy Coley (533381)
Shannon D. Manning (148732)
Soyeon Kim (533382)
Emily Marchiano (533383)
David Alland (31640)

March 2014

Number of single nucleotide polymorphisms differences between each strain.</p

Percent nucleotide sequence identities between the complete genomes of prototype strains of the nine APMV serotypes.

Arthur S. Samuel (367042)
Anandan Paldurai (292415)
Sachin Kumar (356188)
Peter L. Collins (185612)
Siba K. Samal (288692)

February 2013

Percent nucleotide sequence identities between the complete genomes of prototype strains of the n...

Nucleotide differences detected between B. mayonii strains MN14-1420 and MN14-1539*.

Luke C. Kingry (3605903)
Dhwani Batra (3605900)
Adam Replogle (3605906)
Lori A. Rowe (602966)
Bobbi S. Pritt (3605897)
Jeannine M. Petersen (305984)

December 2016

Nucleotide differences detected between B. mayonii strains MN14-1420 and MN14-1539<a ...

Comparison between the nucleotide diversity of MLST housekeeping genes of the study isolates.

Veeraraghavan Balaji (508098)
Susmitha Perumalla (5460197)
Rajamani Perumal (5460206)
Francis Yesurajan Inbanathan (5460203)
Suresh Kumar Rajamani Sekar (5460200)
Miracle Magdelene Paul (5460191)
Rani Diana Sahni (366608)
John Antony Jude Prakash (663945)
Ramya Iyadurai (5460194)

June 2018

Comparison between the nucleotide diversity of MLST housekeeping genes of the study isolates.</p

Nucleotide and amino acid differences for eight haemolysis-associated genes between strongly haemolytic B. hyodysenteriae reference strain WA1, weakly haemolytic strain J11 from herd C, and previously described weakly haemolytic strain D28 [32].

Tom La (157078)
Judith Rohde (3142737)
Nyree Dale Phillips (3142740)
David J. Hampson (157098)

August 2016

Nucleotide and amino acid differences for eight haemolysis-associated genes between strongly haem...

Nucleotide polymorphisms in genome of WY-00W4114 compared to WY96-3418 and overall base pair size increase in WY-00W4114.

Marilynn A. Larson (731300)
Ufuk Nalbantoglu (367427)
Khalid Sayood (51587)
Emily B. Zentz (213123)
Amanda M. Bartling (731301)
Stephen C. Francesconi (367430)
Paul D. Fey (116818)
Michael P. Dempsey (367428)
Steven H. Hinrichs (367431)

April 2015

Nucleotide polymorphisms in genome of WY-00W4114 compared to WY96-3418 and overall base pair size...

Summary of nucleotide and amino acid differences in the coding regions of the five ILTV strains vs the genome sequence of the NCBI ILTV reference sequence (Serva strain).

Alessandra Piccirillo (2148712)
Enrico Lavezzo (2148718)
Giulia Niero (2148721)
Ana Moreno (90186)
Paola Massi (474656)
Elisa Franchin (2148724)
Stefano Toppo (21613)
Cristiano Salata (2148715)
Giorgio Palù (80312)

February 2016

Summary of nucleotide and amino acid differences in the coding regions of the five ILTV strains <...

A pairwise genic comparison of 12 NTHi strains of and the reference strain Rd KW20

Justin S Hogg (48102)
Fen Z Hu (34099)
Benjamin Janto (34106)
Robert Boissy (34109)
Jay Hayes (48103)
Randy Keefe (48104)
J Christopher Post (48105)
Garth D Ehrlich (34110)

December 2011

The comparison of two strains is found at the intersection of the row and column corresponding to th...

Gabriel G. Perron (249221)
Lyle Whyte (711992)
Peter J. Turnbaugh (711993)
Jacqueline Goordial (711994)
William P. Hanage (249299)
Gautam Dantas (484525)
Michael M. Desai (269005)

March 2015

Nucleotide similarities of resistance genes isolated from ancient (red) and modern (black) bacter...

Number of SNPs distinguishing pairs of strains identified in 3,453,192 bp.

Angelo Mazzaglia (166038)
David J. Studholme (57620)
Maria C. Taratufolo (166040)
Rongman Cai (166042)
Nalvo F. Almeida (166044)
Tokia Goodman (166046)
David S. Guttman (131322)
Boris A. Vinatzer (166050)
Giorgio M. Balestra (166054)

May 2012

Number of SNPs distinguishing pairs of strains identified in 3,453,192 bp.</p

Nucleotide (nt265–285) and Amino Acid (aa89–95) Sequences in the NS5A Region of 647 Genotype 1b HCV Strains in the Database.

Yoshihito Uchida (661242)
Jun-ichi Kouyama (661243)
Kayoko Naiki (661244)
Satoshi Mochida (156566)

November 2014

The figures in the lower panel denote the number of HCV strains showing each nucleotide (nt273, 2...

Nucleotide differences and percentages of homology between the new xylose-fermenting yeasts and the type cultures of closest relatives, S. shehatae or S. stipitis.

Hector Urbina (319474)
Meredith Blackwell (248070)

February 2013

Nucleotide differences and percentages of homology between the new xylose-fermenting yeasts and t...

Cladogram of 18 A. actinomycetemcomitans strains and A. aphrophilus NJ8700 based on 150 core genes.

Ruoxing Sun (422924)
Weerayuth Kittichotirat (213325)
Justin Wang (422925)
Minnie Jan (422926)
Weizhen Chen (422927)
Sirkka Asikainen (213334)
Roger Bumgarner (158099)
Casey Chen (42121)

June 2013

In the cladogram, the paired strains (bracketed by red boxes) were more closely related to each o...

Distribution of the percentage of conserved nucleotides among the 1759 core genes of the 76 S. sciuri strains analyzed in this study.

Joana Rolo (167680)
Peder Worning (407329)
Jesper Boye Nielsen (3916208)
Rita Sobral (3916205)
Rory Bowden (179995)
Ons Bouchami (167699)
Peter Damborg (3916202)
Luca Guardabassi (298890)
Vincent Perreten (733413)
Henrik Westh (232180)
Alexander Tomasz (1968)
Hermínia de Lencastre (1970)
Maria Miragaia (167683)

April 2017

The conservation percentage of mecA1 is shown in red (A). Number of discontinuities in the...

Difference in the number of genes in different P450 families between the CSM transcriptome and genomes of other species.

Zhifeng Xu (564780)
Wenyi Zhu (564781)
Yanchao Liu (564782)
Xing Liu (221084)
Qiushuang Chen (564783)
Miao Peng (290897)
Xiangzun Wang (564784)
Guangmao Shen (564785)
Lin He (102807)

May 2014

Difference in the number of genes in different P450 families between the CSM transcriptome and ge...

Number of single nucleotide polymorphisms differences between each strain.

Roberto Colangeli (31628)
Vic L. Arcus (533377)
Ray T. Cursons (533378)
Ali Ruthe (533379)
Noel Karalus (533380)
Kathy Coley (533381)
Shannon D. Manning (148732)
Soyeon Kim (533382)
Emily Marchiano (533383)
David Alland (31640)

March 2014

Number of single nucleotide polymorphisms differences between each strain.</p

Percent nucleotide sequence identities between the complete genomes of prototype strains of the nine APMV serotypes.

Arthur S. Samuel (367042)
Anandan Paldurai (292415)
Sachin Kumar (356188)
Peter L. Collins (185612)
Siba K. Samal (288692)

February 2013

Percent nucleotide sequence identities between the complete genomes of prototype strains of the n...

Nucleotide differences detected between B. mayonii strains MN14-1420 and MN14-1539*.

Luke C. Kingry (3605903)
Dhwani Batra (3605900)
Adam Replogle (3605906)
Lori A. Rowe (602966)
Bobbi S. Pritt (3605897)
Jeannine M. Petersen (305984)

December 2016

Nucleotide differences detected between B. mayonii strains MN14-1420 and MN14-1539<a ...

Comparison between the nucleotide diversity of MLST housekeeping genes of the study isolates.

Veeraraghavan Balaji (508098)
Susmitha Perumalla (5460197)
Rajamani Perumal (5460206)
Francis Yesurajan Inbanathan (5460203)
Suresh Kumar Rajamani Sekar (5460200)
Miracle Magdelene Paul (5460191)
Rani Diana Sahni (366608)
John Antony Jude Prakash (663945)
Ramya Iyadurai (5460194)

June 2018

Comparison between the nucleotide diversity of MLST housekeeping genes of the study isolates.</p

Nucleotide and amino acid differences for eight haemolysis-associated genes between strongly haemolytic B. hyodysenteriae reference strain WA1, weakly haemolytic strain J11 from herd C, and previously described weakly haemolytic strain D28 [32].

Tom La (157078)
Judith Rohde (3142737)
Nyree Dale Phillips (3142740)
David J. Hampson (157098)

August 2016

Nucleotide and amino acid differences for eight haemolysis-associated genes between strongly haem...

Nucleotide polymorphisms in genome of WY-00W4114 compared to WY96-3418 and overall base pair size increase in WY-00W4114.

Marilynn A. Larson (731300)
Ufuk Nalbantoglu (367427)
Khalid Sayood (51587)
Emily B. Zentz (213123)
Amanda M. Bartling (731301)
Stephen C. Francesconi (367430)
Paul D. Fey (116818)
Michael P. Dempsey (367428)
Steven H. Hinrichs (367431)

April 2015

Nucleotide polymorphisms in genome of WY-00W4114 compared to WY96-3418 and overall base pair size...

Summary of nucleotide and amino acid differences in the coding regions of the five ILTV strains vs the genome sequence of the NCBI ILTV reference sequence (Serva strain).

Alessandra Piccirillo (2148712)
Enrico Lavezzo (2148718)
Giulia Niero (2148721)
Ana Moreno (90186)
Paola Massi (474656)
Elisa Franchin (2148724)
Stefano Toppo (21613)
Cristiano Salata (2148715)
Giorgio Palù (80312)

February 2016

Summary of nucleotide and amino acid differences in the coding regions of the five ILTV strains <...

A pairwise genic comparison of 12 NTHi strains of and the reference strain Rd KW20

Justin S Hogg (48102)
Fen Z Hu (34099)
Benjamin Janto (34106)
Robert Boissy (34109)
Jay Hayes (48103)
Randy Keefe (48104)
J Christopher Post (48105)
Garth D Ehrlich (34110)

December 2011

The comparison of two strains is found at the intersection of the row and column corresponding to th...

Gabriel G. Perron (249221)
Lyle Whyte (711992)
Peter J. Turnbaugh (711993)
Jacqueline Goordial (711994)
William P. Hanage (249299)
Gautam Dantas (484525)
Michael M. Desai (269005)

March 2015

Nucleotide similarities of resistance genes isolated from ancient (red) and modern (black) bacter...

Number of SNPs distinguishing pairs of strains identified in 3,453,192 bp.

Angelo Mazzaglia (166038)
David J. Studholme (57620)
Maria C. Taratufolo (166040)
Rongman Cai (166042)
Nalvo F. Almeida (166044)
Tokia Goodman (166046)
David S. Guttman (131322)
Boris A. Vinatzer (166050)
Giorgio M. Balestra (166054)

May 2012

Number of SNPs distinguishing pairs of strains identified in 3,453,192 bp.</p

Nucleotide (nt265–285) and Amino Acid (aa89–95) Sequences in the NS5A Region of 647 Genotype 1b HCV Strains in the Database.

Yoshihito Uchida (661242)
Jun-ichi Kouyama (661243)
Kayoko Naiki (661244)
Satoshi Mochida (156566)

November 2014

The figures in the lower panel denote the number of HCV strains showing each nucleotide (nt273, 2...

Nucleotide differences and percentages of homology between the new xylose-fermenting yeasts and the type cultures of closest relatives, S. shehatae or S. stipitis.

Hector Urbina (319474)
Meredith Blackwell (248070)

February 2013

Nucleotide differences and percentages of homology between the new xylose-fermenting yeasts and t...

The numbers of nucleotide differences of the 150 core genes among <i>A. actinomycetemcomitans</i> strains and <i>A. aphrophilus</i> NJ8700.

Abstract

Extracted data

The numbers of nucleotide differences of the 150 core genes among <i>A. actinomycetemcomitans</i> strains and <i>A. aphrophilus</i> NJ8700.

Abstract

Extracted data

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