<p>Neighbor-joining bootstrap values (before the first slash), maximum-parsimony bootstrap values (between slashes) and maximum-likelihood values (after the second slash) ≥50% are given at branch nodes. Numbers in brackets are Bayasian posterior probabilities. Outgroup: <i>Candida picachoensis</i>. GeneBank accession numbers of the sequences are listed in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0067384#pone-0067384-t001" target="_blank">Table 1</a>. Bar, 0.01 substitutions per nucleotide position.</p
<p>The following four methods were used for the 68 shared genes data set: Bayesian inference (BI), m...
<p>Neighbor-joining tree representing the relationship of all sequences with reference sequences. So...
<p>Sequence information was summarized in <a href="http://www.plosone.org/article/info:doi/10.1371/j...
<p>The phylogenetic tree based on (A) concatenated 7 MLST gene sequences, (B) concatenated 7 MLST ge...
<p>Phylogenetic trees (Neighbor-Joining) calculated for the S, M and L segment sequences of PUUV, an...
<p>Bootstrap values calculated for 1000 replications are indicated. Bar, 2 nt substitution per 100 n...
<p>Bootstrap values, expressed as percentages of 1,000 replications, are given at branching points. ...
<p>The ITS sequences obtained in this work were indicated in bold. Bootstrap values were indicated a...
<p>The phylogenetic tree was constructed using the neighbor-joining method by MEGA 6.0 based on 1372...
Supplementary Figure (S1): Bayesian 50% majority rule phylogram of 16S ribosomal RNA region showing ...
<p>Phylogenetic trees of 6 Rec-mas strains based on (A) the partial <i>hsp65</i> gene (603 bp) and (...
<p>Numbers in the tree represent the bootstrap value (bootstrap values below 50% are not shown at th...
<p>A, Neighbor-joining phylogenetic tree for 120 <i>gag</i> sequences and relative reference sequenc...
<p>Bootstrap values are on 500 replicates. The topology of branch with the bootstrap value was also ...
<p>(A) Neighbor-joining tree, bootstrap values over 80% are labelled on the branches; (B) Maximum-li...
<p>The following four methods were used for the 68 shared genes data set: Bayesian inference (BI), m...
<p>Neighbor-joining tree representing the relationship of all sequences with reference sequences. So...
<p>Sequence information was summarized in <a href="http://www.plosone.org/article/info:doi/10.1371/j...
<p>The phylogenetic tree based on (A) concatenated 7 MLST gene sequences, (B) concatenated 7 MLST ge...
<p>Phylogenetic trees (Neighbor-Joining) calculated for the S, M and L segment sequences of PUUV, an...
<p>Bootstrap values calculated for 1000 replications are indicated. Bar, 2 nt substitution per 100 n...
<p>Bootstrap values, expressed as percentages of 1,000 replications, are given at branching points. ...
<p>The ITS sequences obtained in this work were indicated in bold. Bootstrap values were indicated a...
<p>The phylogenetic tree was constructed using the neighbor-joining method by MEGA 6.0 based on 1372...
Supplementary Figure (S1): Bayesian 50% majority rule phylogram of 16S ribosomal RNA region showing ...
<p>Phylogenetic trees of 6 Rec-mas strains based on (A) the partial <i>hsp65</i> gene (603 bp) and (...
<p>Numbers in the tree represent the bootstrap value (bootstrap values below 50% are not shown at th...
<p>A, Neighbor-joining phylogenetic tree for 120 <i>gag</i> sequences and relative reference sequenc...
<p>Bootstrap values are on 500 replicates. The topology of branch with the bootstrap value was also ...
<p>(A) Neighbor-joining tree, bootstrap values over 80% are labelled on the branches; (B) Maximum-li...
<p>The following four methods were used for the 68 shared genes data set: Bayesian inference (BI), m...
<p>Neighbor-joining tree representing the relationship of all sequences with reference sequences. So...
<p>Sequence information was summarized in <a href="http://www.plosone.org/article/info:doi/10.1371/j...