<p>speedup<sup>a</sup>: speedup factor per EM loop ; speedup<sup>b</sup>: speedup factor of total execution time.</p
<p>(a) Speedup curves when 50% genes were filtered out at data preprocessing stage. (b) Speedup curv...
<p>Speedups of gPGA for different MCMC generation <i>g</i> on GPU, <i>g</i>∊{10000, 100000, 1000000,...
<p>Time performance of analyzing the GPU-accelerated method developed in this study versus a CPU-bas...
Parallel speedup and efficiency of the benchmark system of Sec. Performance as a function of the num...
Speedup of different number of queries that MultiQx-GPU Optimization and Two-stage Model over sequen...
<p>Speedups of gPGA for different number of Markov chains <i>m</i> on GPU, <i>m</i>∊{1, 2}.</p
<p>Speedups of gPGA for different sequence length <i>n</i> on GPU, <i>n</i>∊{1000, 6000, 11000, 1600...
<p>A series of optimizations are compared in which the number of calculations (and thus the total ti...
<p>In this test we used a data set with . We achieve a performance speedup that is slightly below li...
Speedup of two queries combinations that MultiQx-GPU Optimization and Two-stage Model over sequentia...
We develop a microbenchmark-based performance model for NVIDIA GeForce 200-series GPUs. Our model id...
<p>Computation time of the OSEM algorithm (in seconds) and speedup by the GPU implementation based o...
<p>Speed-ups of QuickProbs (CPU+GPU) over MSAProbs (CPU) across different hardware configurations ar...
<p>Speedups of gPGA for different number of locus data <i>l</i> on GPU, <i>l</i>∊{1, 2, 4, 8}.</p
<p>The total number of output ports exposed by each LPU was varied between 250 and 10,000 at 250 por...
<p>(a) Speedup curves when 50% genes were filtered out at data preprocessing stage. (b) Speedup curv...
<p>Speedups of gPGA for different MCMC generation <i>g</i> on GPU, <i>g</i>∊{10000, 100000, 1000000,...
<p>Time performance of analyzing the GPU-accelerated method developed in this study versus a CPU-bas...
Parallel speedup and efficiency of the benchmark system of Sec. Performance as a function of the num...
Speedup of different number of queries that MultiQx-GPU Optimization and Two-stage Model over sequen...
<p>Speedups of gPGA for different number of Markov chains <i>m</i> on GPU, <i>m</i>∊{1, 2}.</p
<p>Speedups of gPGA for different sequence length <i>n</i> on GPU, <i>n</i>∊{1000, 6000, 11000, 1600...
<p>A series of optimizations are compared in which the number of calculations (and thus the total ti...
<p>In this test we used a data set with . We achieve a performance speedup that is slightly below li...
Speedup of two queries combinations that MultiQx-GPU Optimization and Two-stage Model over sequentia...
We develop a microbenchmark-based performance model for NVIDIA GeForce 200-series GPUs. Our model id...
<p>Computation time of the OSEM algorithm (in seconds) and speedup by the GPU implementation based o...
<p>Speed-ups of QuickProbs (CPU+GPU) over MSAProbs (CPU) across different hardware configurations ar...
<p>Speedups of gPGA for different number of locus data <i>l</i> on GPU, <i>l</i>∊{1, 2, 4, 8}.</p
<p>The total number of output ports exposed by each LPU was varied between 250 and 10,000 at 250 por...
<p>(a) Speedup curves when 50% genes were filtered out at data preprocessing stage. (b) Speedup curv...
<p>Speedups of gPGA for different MCMC generation <i>g</i> on GPU, <i>g</i>∊{10000, 100000, 1000000,...
<p>Time performance of analyzing the GPU-accelerated method developed in this study versus a CPU-bas...
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