Candidate antigens for mouse sera.

The best recombinant salivary candidates as antigens for detection of anti-saliva antibodies.

Tereza Lestinova (760891)
Iva Rohousova (151894)
Michal Sima (528441)
Camila I. de Oliveira (111155)
Petr Volf (48916)

July 2017

The best recombinant salivary candidates as antigens for detection of anti-saliva antibodies.</p

Table of top COVID19-associated full amino-acid IgH clonotype (CDR3+VJ), containing their CDR3 amino acid sequence, V and J gene choices, Ppost and value, posterior probability of being associated (p), and index of reported antibody match from the curated database (index column in S3 Table).

María Ruiz Ortega (14676280)
Natanael Spisak (12733857)
Thierry Mora (369624)
Aleksandra M. Walczak (7252508)

February 2023

Table of top COVID19-associated full amino-acid IgH clonotype (CDR3+VJ), containing their CDR3 amino...

Epitope mapping of sera from MSP-1-BBM immunized mice by recognition of peptide epitopes within the MSP-1 Block 2 region of the MSP-1-BBM construct.

Graeme J. M. Cowan (199309)
Ulrike Bockau (27814)
Janna Eleni-Muus (516666)
Ingo Aldag (15364)
Kay Samuel (190790)
Alison M. Creasey (199311)
Marcus W. W. Hartmann (516667)
David R. Cavanagh (199326)

January 2014

A series of 133-terminally biotinylated dodecapeptides, representing the sequence diversity of al...

Top candidate antigens selected by the SAS for the melanoma patient serum.

Xinyue Liu (170148)
Qiang Hu (122686)
Song Liu (9858)
Luke J. Tallo (427789)
Lisa Sadzewicz (427790)
Cassandra A. Schettine (427791)
Mikhail Nikiforov (427792)
Elena N. Klyushnenkova (427793)
Yurij Ionov (427794)

June 2013

The table shows the top candidate antigens selected for the antibodies of the melanoma patient se...

Motifs identified by MEME software for the top candidate antigens selected for the PAP1 and PAP3 antisera.

Xinyue Liu (170148)
Qiang Hu (122686)
Song Liu (9858)
Luke J. Tallo (427789)
Lisa Sadzewicz (427790)
Cassandra A. Schettine (427791)
Mikhail Nikiforov (427792)
Elena N. Klyushnenkova (427793)
Yurij Ionov (427794)

June 2013

Motifs for the antigens are related to the motifs identified for the corresponding top 500 the mo...

Epitope mapping for human PAP-specific antibodies from four immune sera samples

Xinyue Liu (170148)
Qiang Hu (122686)
Song Liu (9858)
Luke J. Tallo (427789)
Lisa Sadzewicz (427790)
Cassandra A. Schettine (427791)
Mikhail Nikiforov (427792)
Elena N. Klyushnenkova (427793)
Yurij Ionov (427794)

June 2013

The reactivity of 4 mouse PAP-specific immune sera (PAP1, PAP2, PAP3 and PAP4) was tested by ELIS...

Epitope profile of the PAP protein generated by PAP1 mouse antiserum.

Xinyue Liu (170148)
Qiang Hu (122686)
Song Liu (9858)
Luke J. Tallo (427789)
Lisa Sadzewicz (427790)
Cassandra A. Schettine (427791)
Mikhail Nikiforov (427792)
Elena N. Klyushnenkova (427793)
Yurij Ionov (427794)

June 2013

(A) The NP_001090.2 PAP variant amino acid sequence and the 40 matching peptides with the ...

Summary table containing all reported antibodies extracted from the different studies (indicated in column References) used for sequence matching. When known, both heavy and light chain information are provided (CDR3 amino acid sequence, V and J gene choices) as well as the antigen target by the antibody.

María Ruiz Ortega (14676280)
Natanael Spisak (12733857)
Thierry Mora (369624)
Aleksandra M. Walczak (7252508)

February 2023

Summary table containing all reported antibodies extracted from the different studies (indicated in ...

Epitopes predicted by the SVMTriP inside the PAP protein.

Xinyue Liu (170148)
Qiang Hu (122686)
Song Liu (9858)
Luke J. Tallo (427789)
Lisa Sadzewicz (427790)
Cassandra A. Schettine (427791)
Mikhail Nikiforov (427792)
Elena N. Klyushnenkova (427793)
Yurij Ionov (427794)

June 2013

The table shows the hypothetical epitopes predicted by the SVMTriP software on the PAP protein. I...

Serum Antibody Repertoire Profiling Using In Silico Antigen Screen.

Xinyue Liu
Qiang Hu
Song Liu
Luke J Tallo
Lisa Sadzewicz
Cassandra A Schettine
Mikhail Nikiforov
Elena N Klyushnenkova
Yurij Ionov

Serum antibodies are valuable source of information on the health state of an organism. The profiles...

List of antibodies, table of anti-mouse antibodies used in this study including supplier and identifier.

Teiko Kawahigashi (17867328)
Shoya Iwanami (3945266)
Munetomo Takahashi (15162576)
Joydeep Bhadury (769943)
Shingo Iwami (266092)
Satoshi Yamazaki (150450)

January 2024

(A) Antibodies used to collect HSCs FACS. (B) Antibodies used for the analysis of 14-day culture of ...

Schematic representation of the antigen selection process.

Nora Céspedes (587965)
Catherine Habel (587966)
Mary Lopez-Perez (123279)
Angélica Castellanos (587967)
Andrey V. Kajava (87242)
Catherine Servis (273314)
Ingrid Felger (92160)
Remy Moret (587968)
Myriam Arévalo-Herrera (2576233)
Giampietro Corradin (27387)
Sócrates Herrera (2576236)

June 2014

Download selection is represented: first, 50 P. vivax antigens containing α-helical coiled...

Serum Antibody Repertoire Profiling Using In Silico Antigen Screen

Xinyue Liu (170148)
Qiang Hu (122686)
Song Liu (9858)
Luke J. Tallo (427789)
Lisa Sadzewicz (427790)
Cassandra A. Schettine (427791)
Mikhail Nikiforov (427792)
Elena N. Klyushnenkova (427793)
Yurij Ionov (427794)

June 2013

<div>Serum antibodies are valuable source of information on the health state of an organism. The ...

Computer-predicted antigenicity scores for two peptides.

Michal Sima (528441)
Blanka Ferencova (3177771)
Tapan Bhattacharyya (172083)
Michael A. Miles (43726)
Sergey V. Litvinov (567607)
Asrat Hailu (59005)
Gad Baneth (254948)
Petr Volf (48916)

January 2019

One peptide with the highest antigenicity score (calculated by EpiQuest-B) is displayed for each of ...

The search for target antigen in Aire KO mice serum with Western blotting.

Hironori Kurisaki (450300)
Yukihiro Nagao (450301)
Seiho Nagafuchi (450302)
Masao Mitsuyama (450303)

August 2013

A. With the sample for the other organ tissue protein homogenates(thymus, liver, submandibular gl...

The best recombinant salivary candidates as antigens for detection of anti-saliva antibodies.

Tereza Lestinova (760891)
Iva Rohousova (151894)
Michal Sima (528441)
Camila I. de Oliveira (111155)
Petr Volf (48916)

July 2017

The best recombinant salivary candidates as antigens for detection of anti-saliva antibodies.</p

Table of top COVID19-associated full amino-acid IgH clonotype (CDR3+VJ), containing their CDR3 amino acid sequence, V and J gene choices, Ppost and value, posterior probability of being associated (p), and index of reported antibody match from the curated database (index column in S3 Table).

María Ruiz Ortega (14676280)
Natanael Spisak (12733857)
Thierry Mora (369624)
Aleksandra M. Walczak (7252508)

February 2023

Table of top COVID19-associated full amino-acid IgH clonotype (CDR3+VJ), containing their CDR3 amino...

Epitope mapping of sera from MSP-1-BBM immunized mice by recognition of peptide epitopes within the MSP-1 Block 2 region of the MSP-1-BBM construct.

Graeme J. M. Cowan (199309)
Ulrike Bockau (27814)
Janna Eleni-Muus (516666)
Ingo Aldag (15364)
Kay Samuel (190790)
Alison M. Creasey (199311)
Marcus W. W. Hartmann (516667)
David R. Cavanagh (199326)

January 2014

A series of 133-terminally biotinylated dodecapeptides, representing the sequence diversity of al...

Top candidate antigens selected by the SAS for the melanoma patient serum.

Xinyue Liu (170148)
Qiang Hu (122686)
Song Liu (9858)
Luke J. Tallo (427789)
Lisa Sadzewicz (427790)
Cassandra A. Schettine (427791)
Mikhail Nikiforov (427792)
Elena N. Klyushnenkova (427793)
Yurij Ionov (427794)

June 2013

The table shows the top candidate antigens selected for the antibodies of the melanoma patient se...

Motifs identified by MEME software for the top candidate antigens selected for the PAP1 and PAP3 antisera.

Xinyue Liu (170148)
Qiang Hu (122686)
Song Liu (9858)
Luke J. Tallo (427789)
Lisa Sadzewicz (427790)
Cassandra A. Schettine (427791)
Mikhail Nikiforov (427792)
Elena N. Klyushnenkova (427793)
Yurij Ionov (427794)

June 2013

Motifs for the antigens are related to the motifs identified for the corresponding top 500 the mo...

Epitope mapping for human PAP-specific antibodies from four immune sera samples

Xinyue Liu (170148)
Qiang Hu (122686)
Song Liu (9858)
Luke J. Tallo (427789)
Lisa Sadzewicz (427790)
Cassandra A. Schettine (427791)
Mikhail Nikiforov (427792)
Elena N. Klyushnenkova (427793)
Yurij Ionov (427794)

June 2013

The reactivity of 4 mouse PAP-specific immune sera (PAP1, PAP2, PAP3 and PAP4) was tested by ELIS...

Epitope profile of the PAP protein generated by PAP1 mouse antiserum.

Xinyue Liu (170148)
Qiang Hu (122686)
Song Liu (9858)
Luke J. Tallo (427789)
Lisa Sadzewicz (427790)
Cassandra A. Schettine (427791)
Mikhail Nikiforov (427792)
Elena N. Klyushnenkova (427793)
Yurij Ionov (427794)

June 2013

(A) The NP_001090.2 PAP variant amino acid sequence and the 40 matching peptides with the ...

Summary table containing all reported antibodies extracted from the different studies (indicated in column References) used for sequence matching. When known, both heavy and light chain information are provided (CDR3 amino acid sequence, V and J gene choices) as well as the antigen target by the antibody.

María Ruiz Ortega (14676280)
Natanael Spisak (12733857)
Thierry Mora (369624)
Aleksandra M. Walczak (7252508)

February 2023

Summary table containing all reported antibodies extracted from the different studies (indicated in ...

Epitopes predicted by the SVMTriP inside the PAP protein.

Xinyue Liu (170148)
Qiang Hu (122686)
Song Liu (9858)
Luke J. Tallo (427789)
Lisa Sadzewicz (427790)
Cassandra A. Schettine (427791)
Mikhail Nikiforov (427792)
Elena N. Klyushnenkova (427793)
Yurij Ionov (427794)

June 2013

The table shows the hypothetical epitopes predicted by the SVMTriP software on the PAP protein. I...

Serum Antibody Repertoire Profiling Using In Silico Antigen Screen.

Xinyue Liu
Qiang Hu
Song Liu
Luke J Tallo
Lisa Sadzewicz
Cassandra A Schettine
Mikhail Nikiforov
Elena N Klyushnenkova
Yurij Ionov

Serum antibodies are valuable source of information on the health state of an organism. The profiles...

List of antibodies, table of anti-mouse antibodies used in this study including supplier and identifier.

Teiko Kawahigashi (17867328)
Shoya Iwanami (3945266)
Munetomo Takahashi (15162576)
Joydeep Bhadury (769943)
Shingo Iwami (266092)
Satoshi Yamazaki (150450)

January 2024

(A) Antibodies used to collect HSCs FACS. (B) Antibodies used for the analysis of 14-day culture of ...

Schematic representation of the antigen selection process.

Nora Céspedes (587965)
Catherine Habel (587966)
Mary Lopez-Perez (123279)
Angélica Castellanos (587967)
Andrey V. Kajava (87242)
Catherine Servis (273314)
Ingrid Felger (92160)
Remy Moret (587968)
Myriam Arévalo-Herrera (2576233)
Giampietro Corradin (27387)
Sócrates Herrera (2576236)

June 2014

Download selection is represented: first, 50 P. vivax antigens containing α-helical coiled...

Serum Antibody Repertoire Profiling Using In Silico Antigen Screen

Xinyue Liu (170148)
Qiang Hu (122686)
Song Liu (9858)
Luke J. Tallo (427789)
Lisa Sadzewicz (427790)
Cassandra A. Schettine (427791)
Mikhail Nikiforov (427792)
Elena N. Klyushnenkova (427793)
Yurij Ionov (427794)

June 2013

<div>Serum antibodies are valuable source of information on the health state of an organism. The ...

Computer-predicted antigenicity scores for two peptides.

Michal Sima (528441)
Blanka Ferencova (3177771)
Tapan Bhattacharyya (172083)
Michael A. Miles (43726)
Sergey V. Litvinov (567607)
Asrat Hailu (59005)
Gad Baneth (254948)
Petr Volf (48916)

January 2019

One peptide with the highest antigenicity score (calculated by EpiQuest-B) is displayed for each of ...

The search for target antigen in Aire KO mice serum with Western blotting.

Hironori Kurisaki (450300)
Yukihiro Nagao (450301)
Seiho Nagafuchi (450302)
Masao Mitsuyama (450303)

August 2013

A. With the sample for the other organ tissue protein homogenates(thymus, liver, submandibular gl...

The best recombinant salivary candidates as antigens for detection of anti-saliva antibodies.

Tereza Lestinova (760891)
Iva Rohousova (151894)
Michal Sima (528441)
Camila I. de Oliveira (111155)
Petr Volf (48916)

July 2017

The best recombinant salivary candidates as antigens for detection of anti-saliva antibodies.</p

Table of top COVID19-associated full amino-acid IgH clonotype (CDR3+VJ), containing their CDR3 amino acid sequence, V and J gene choices, Ppost and value, posterior probability of being associated (p), and index of reported antibody match from the curated database (index column in S3 Table).

María Ruiz Ortega (14676280)
Natanael Spisak (12733857)
Thierry Mora (369624)
Aleksandra M. Walczak (7252508)

February 2023

Table of top COVID19-associated full amino-acid IgH clonotype (CDR3+VJ), containing their CDR3 amino...

Epitope mapping of sera from MSP-1-BBM immunized mice by recognition of peptide epitopes within the MSP-1 Block 2 region of the MSP-1-BBM construct.

Graeme J. M. Cowan (199309)
Ulrike Bockau (27814)
Janna Eleni-Muus (516666)
Ingo Aldag (15364)
Kay Samuel (190790)
Alison M. Creasey (199311)
Marcus W. W. Hartmann (516667)
David R. Cavanagh (199326)

January 2014

A series of 133-terminally biotinylated dodecapeptides, representing the sequence diversity of al...

Candidate antigens for mouse sera.

Abstract

Extracted data

Candidate antigens for mouse sera.

Abstract

Extracted data

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