<p>A. Locations of putative transcription factor binding sites in the 3.9 kb <i>Oog1</i> promoter region (on chromosome 12, NT_039551) are shown by arrows. E-box (-188 bp), SP1 binding element (-1369 bp), and NBEs (-2829 bp and -3490 bp) are conserved among upstream regions of the five copies of <i>Oog1</i>. B. Promoter regions of the five copies of <i>Oog1</i>. All five sequences share a ~3.9 kb long, highly homologous region including a TATA box. Some sequences have sequence insertions at -0.7 kb, -2.7 kb, and -3.2 kb from the TATA box. The sequences on chromosome 4 (the upstream regions of NM_001007077 and NM_001177542) have the largest gaps at -2.7 kb.</p
<p>The nucleotide sequence +28 to −2190 corresponding to the proximal 2-kb hPGC-1α promoter is shown...
Central to reconstruction of cis-regulatory networks is identification and classification of natural...
Putative bHLH TFbs (A) and bZIP TFbs (B) located on positive and negative strands of DNA are shown a...
<p>Numbers refer to the transcriptional start position (TSP, +1), indicated by bold black arrows, an...
Ong with the positions of the repetitive DNA elements (black) at that locus. FOSL1 is encoded on the...
<p>(A) UCSC browser view of three pol II (<i>RNU4atac</i>, <i>U1-like-5</i>, and <i>Unknown-6</i>) a...
<p>The non-coding region (603 bp), which contains the promoter sequences of the <i>mbo</i> operon. T...
<p>DNA is shown as a solid black line. Nucleosomes -1, -2 and -3 are numbered relative to the transc...
Abstract Background Characterizing recurring sequence patterns in human promoters has been a challen...
Central to reconstruction of cis-regulatory networks is identification and classification of natural...
Putative NAC TFbs (A) and WRKY TFbs (B) located on positive and negative strands of DNA are shown as...
humans and is located on the short arm of chromosome 12 (12p13.31) from 7940390- 7948655. A 299 bp l...
<p>A sequence analysis of the Mcl-1 promoter region showed that the Mcl-1 promoter region includes 5...
We address the problem of comparing and characterizing the promoter regions of genes with similar ex...
The 5'-flanking region of the human Sp1 gene was cloned and characterized. Sequence analysis of this...
<p>The nucleotide sequence +28 to −2190 corresponding to the proximal 2-kb hPGC-1α promoter is shown...
Central to reconstruction of cis-regulatory networks is identification and classification of natural...
Putative bHLH TFbs (A) and bZIP TFbs (B) located on positive and negative strands of DNA are shown a...
<p>Numbers refer to the transcriptional start position (TSP, +1), indicated by bold black arrows, an...
Ong with the positions of the repetitive DNA elements (black) at that locus. FOSL1 is encoded on the...
<p>(A) UCSC browser view of three pol II (<i>RNU4atac</i>, <i>U1-like-5</i>, and <i>Unknown-6</i>) a...
<p>The non-coding region (603 bp), which contains the promoter sequences of the <i>mbo</i> operon. T...
<p>DNA is shown as a solid black line. Nucleosomes -1, -2 and -3 are numbered relative to the transc...
Abstract Background Characterizing recurring sequence patterns in human promoters has been a challen...
Central to reconstruction of cis-regulatory networks is identification and classification of natural...
Putative NAC TFbs (A) and WRKY TFbs (B) located on positive and negative strands of DNA are shown as...
humans and is located on the short arm of chromosome 12 (12p13.31) from 7940390- 7948655. A 299 bp l...
<p>A sequence analysis of the Mcl-1 promoter region showed that the Mcl-1 promoter region includes 5...
We address the problem of comparing and characterizing the promoter regions of genes with similar ex...
The 5'-flanking region of the human Sp1 gene was cloned and characterized. Sequence analysis of this...
<p>The nucleotide sequence +28 to −2190 corresponding to the proximal 2-kb hPGC-1α promoter is shown...
Central to reconstruction of cis-regulatory networks is identification and classification of natural...
Putative bHLH TFbs (A) and bZIP TFbs (B) located on positive and negative strands of DNA are shown a...