<p>Each figure is centered by the index SNP (big red) with rs-number and p-value information (stage 1 only); another big rectangle is the best SNP in African Americans, with information including MAF = minor allele frequency; linkage disequilibrium information in HapMap YRI and CEU<i>; P<sub>D</sub>, P<sub>F</sub>, and P<sub>J</sub></i> are the single GC-corrected p-value obtained from discovery cohorts only, follow-up cohorts and joint discovery and follow-up data, respectively. Double GC-corrected p-value can be found in <a href="http://www.plosgenetics.org/article/info:doi/10.1371/journal.pgen.1003681#pgen-1003681-t004" target="_blank"><b>Table 4</b></a>.</p
<p>Linkage disequilibrium was calculated in ASW (African ancestry in Southwest USA). The <i>CELSR2/P...
<p>(A) The results of association for 1,277 genotyped and imputed SNPs in the 1.2-Mb region containi...
<p>A) Chromosome 5 near <i>TMEM161B</i> and <i>MEF2C</i>, B) Chromosome 17 on <i>SFRS2</i> and C) Ch...
Horizontal lines represent the 4-SNP windows. X-axis shows the SNPs genotyped in the regions based o...
<p>The top half of each figure has physical position along the x axis, and the −log<sub>10</sub> of ...
<p>Locus Zoom plots for selected gene regions in age at natural menopause analysis. Vertical axis is...
Horizontal lines represent the 4-SNP windows. X-axis shows the SNPs genotyped in the regions based o...
<p>SNPs plotted with their –log<sub>10</sub> (<i>P</i>-values) in the GWAS based on their physical c...
Horizontal lines represent the 4-SNP windows. X-axis shows the SNPs genotyped in the regions based o...
<p>Part (A) shows a conventional manhattan plot as produced with the default options on an artificia...
<p>Locus Zoom plots for selected gene regions in age at menarche analysis. Vertical axis is –log<sub...
<p>MAF = minor allele frequency. The p-values for the index SNP rs2075064 in <i>LHX2</i> loci are 5....
Horizontal lines represent the 4-SNP windows. X-axis shows the SNPs genotyped in the regions based o...
<p><i>P</i>-values are estimated in African Americans and are plotted using linkage disequilibrium e...
<p>This figure is the regional association plot of SNP rs213276 on chromosome 7 that reached gene-wi...
<p>Linkage disequilibrium was calculated in ASW (African ancestry in Southwest USA). The <i>CELSR2/P...
<p>(A) The results of association for 1,277 genotyped and imputed SNPs in the 1.2-Mb region containi...
<p>A) Chromosome 5 near <i>TMEM161B</i> and <i>MEF2C</i>, B) Chromosome 17 on <i>SFRS2</i> and C) Ch...
Horizontal lines represent the 4-SNP windows. X-axis shows the SNPs genotyped in the regions based o...
<p>The top half of each figure has physical position along the x axis, and the −log<sub>10</sub> of ...
<p>Locus Zoom plots for selected gene regions in age at natural menopause analysis. Vertical axis is...
Horizontal lines represent the 4-SNP windows. X-axis shows the SNPs genotyped in the regions based o...
<p>SNPs plotted with their –log<sub>10</sub> (<i>P</i>-values) in the GWAS based on their physical c...
Horizontal lines represent the 4-SNP windows. X-axis shows the SNPs genotyped in the regions based o...
<p>Part (A) shows a conventional manhattan plot as produced with the default options on an artificia...
<p>Locus Zoom plots for selected gene regions in age at menarche analysis. Vertical axis is –log<sub...
<p>MAF = minor allele frequency. The p-values for the index SNP rs2075064 in <i>LHX2</i> loci are 5....
Horizontal lines represent the 4-SNP windows. X-axis shows the SNPs genotyped in the regions based o...
<p><i>P</i>-values are estimated in African Americans and are plotted using linkage disequilibrium e...
<p>This figure is the regional association plot of SNP rs213276 on chromosome 7 that reached gene-wi...
<p>Linkage disequilibrium was calculated in ASW (African ancestry in Southwest USA). The <i>CELSR2/P...
<p>(A) The results of association for 1,277 genotyped and imputed SNPs in the 1.2-Mb region containi...
<p>A) Chromosome 5 near <i>TMEM161B</i> and <i>MEF2C</i>, B) Chromosome 17 on <i>SFRS2</i> and C) Ch...