Infinium Chip Souce Sequences

Genetics and population analysis R/Bioconductor software for Illumina’s Infinium whole-genome

Genotyping Beadchips
Matthew E. Ritchie
Benilton S. Carvalho
Kurt N. Hetrick
Simon Tavaré
Rafael A. Irizarry

August 2016

Summary: Illumina produces a number of microarray-based technologies for human genotyping. An Infini...

Performance of a multi-species-plant illumina beadchip

Le Paslier, Marie-Christine
Berard, Aurélie
Chauveau, Aurelie
Marquand, Elodie
Boland-Auge, Anne
Eggen, André
Brunel, Dominique
Faivre-Rampant, Patricia

January 2016

Since mid-2005, Illumina Infinium® genotyping arrays provide data with good accuracy for thousands o...

Genotype data for GWAS.xlsx

Lili Qi (6387485)

February 2019

Genotype data using the Illumina Infinium chip containing 8,723 bi-allelic SNP marker

Infinium Chip Souce Sequences

Kozak, Genevieve M.
Brennan, Reid S.
Berdan, Emma L.
Fuller, Rebecca C.
Whitehead, Andrew

August 2013

Source sequences for Illumina Infinium Bead Chip custom designed for Lucania. 4,545 SNPs from 454 c...

Video Article Infinium Assay for Large-scale SNP Genotyping Applications

Adam J. Adler
Graham B. Wiley
Patrick M. Gaffney

January 2013

doi:10.3791/50683 (2013). Genotyping variants in the human genome has proven to be an efficient meth...

InfiniumFWSW_fst

Genevieve M. Kozak (3248790)
Reid S. Brennan (3254880)
Emma L. Berdan (3254877)
Rebecca C. Fuller (3254883)
Andrew Whitehead (7604)

October 2016

Fst calculations between all freshwater and all saltwater L. parva (18 freshwater, 21 saltwater indi...

Sequences for SNPs used with Illumina's Golden Gate Assay

Christina Zakas (183010)
John Wares (242115)

October 2016

This is a list of the 84 SNPs and their flanking regions that were developed for use with Illumina's...

Methods for the design, implementation, and analysis of illumina infinium™ SNP assays in plants

Chagné, David
Bianco, Luca
Lawley, Cindy
Micheletti, Diego
Jacobs, Jeanne M. E.

January 2014

The advent of Next-Generation sequencing-by-synthesis technologies has fuelled SNP discovery, genoty...

Design of a Bovine Low-Density SNP Array Optimized for

Didier Boichard
Hoyoung Chung
Romain Dassonneville
Xavier David
Andre ́ Eggen
Kimberly J. Gietzen
Ben J. Hayes
Cynthia T. Lawley
Tad S. Sonstegard
Curtis P. Van Tassell
Paul M. Vanraden
Karine A. Viaud-martinez
George R. Wiggans
For The

August 2016

The Illumina BovineLD BeadChip was designed to support imputation to higher density genotypes in dai...

Design of a bovine low-density snp array optimized for imputation

Boichard, Didier
Chung, Hoyoung
Dassonneville, Romain
David, Xavier
Eggen, Andre
Fritz, Sebastien
Gietzen, Kimberly J.
Hayes, Ben J.
Lawley, Cynthia T.
Sonstegard, Tad S.
Van Tassell, Curtis P.
VanRaden, Paul M.
Viaud-Martinez, Karine A.
Wiggans, George R.

March 2012

The Illumina BovineLD BeadChip was designed to support imputation to higher density genotypes in dai...

Design of a bovine low-density SNP array optimized for imputation.

Didier Boichard
Hoyoung Chung
Romain Dassonneville
Xavier David
André Eggen
Sébastien Fritz
Kimberly J Gietzen
Ben J Hayes
Cynthia T Lawley
Tad S Sonstegard
Curtis P Van Tassell
Paul M VanRaden
Karine A Viaud-Martinez
George R Wiggans

The Illumina BovineLD BeadChip was designed to support imputation to higher density genotypes in dai...

RSBL-2012-0942_DeepSea_aDNA_IlluminaSeqs

Lejzerowicz, Franck
Esling, Philippe
Majewski, Wojciech
Szczuciński, Witold
Decelle, Johan
Obadia, Cyril
Martinez Arbizu, Pedro
Pawlowski, Jan

May 2013

DNA sequences generated by cloning/Sanger sequencing and by Illumina sequencing (MiSeq instrument). ...

Design of a Bovine Low-Density SNP Array Optimized for Imputation

Didier Boichard (121003)
Hoyoung Chung (175120)
Romain Dassonneville (175125)
Xavier David (175133)
André Eggen (47250)
Sébastien Fritz (175137)
Kimberly J. Gietzen (175145)
Ben J. Hayes (175151)
Cynthia T. Lawley (171073)
Tad S. Sonstegard (175161)
Curtis P. Van Tassell (175167)
Paul M. VanRaden (175174)
Karine A. Viaud-Martinez (175180)
George R. Wiggans (175183)

March 2012

<div><p>The Illumina BovineLD BeadChip was designed to support imputation to higher density genotype...

BeadArray-based genotyping.

Butler, H
Ragoussis, J

January 2008

There is a demand for technologies that allow the interrogation of large numbers of SNP polymorphism...

Velvet_Reference_protein_matching.txt

Kozak, Genevieve M.
Brennan, Reid S.
Berdan, Emma L.
Fuller, Rebecca C.
Whitehead, Andrew

August 2013

Sequences of our reference based on the Lucania parva velvet assembly (kmer=25) with a total of 24,7...

Genetics and population analysis R/Bioconductor software for Illumina’s Infinium whole-genome

Genotyping Beadchips
Matthew E. Ritchie
Benilton S. Carvalho
Kurt N. Hetrick
Simon Tavaré
Rafael A. Irizarry

August 2016

Summary: Illumina produces a number of microarray-based technologies for human genotyping. An Infini...

Performance of a multi-species-plant illumina beadchip

Le Paslier, Marie-Christine
Berard, Aurélie
Chauveau, Aurelie
Marquand, Elodie
Boland-Auge, Anne
Eggen, André
Brunel, Dominique
Faivre-Rampant, Patricia

January 2016

Since mid-2005, Illumina Infinium® genotyping arrays provide data with good accuracy for thousands o...

Genotype data for GWAS.xlsx

Lili Qi (6387485)

February 2019

Genotype data using the Illumina Infinium chip containing 8,723 bi-allelic SNP marker

Infinium Chip Souce Sequences

Kozak, Genevieve M.
Brennan, Reid S.
Berdan, Emma L.
Fuller, Rebecca C.
Whitehead, Andrew

August 2013

Source sequences for Illumina Infinium Bead Chip custom designed for Lucania. 4,545 SNPs from 454 c...

Video Article Infinium Assay for Large-scale SNP Genotyping Applications

Adam J. Adler
Graham B. Wiley
Patrick M. Gaffney

January 2013

doi:10.3791/50683 (2013). Genotyping variants in the human genome has proven to be an efficient meth...

InfiniumFWSW_fst

Genevieve M. Kozak (3248790)
Reid S. Brennan (3254880)
Emma L. Berdan (3254877)
Rebecca C. Fuller (3254883)
Andrew Whitehead (7604)

October 2016

Fst calculations between all freshwater and all saltwater L. parva (18 freshwater, 21 saltwater indi...

Sequences for SNPs used with Illumina's Golden Gate Assay

Christina Zakas (183010)
John Wares (242115)

October 2016

This is a list of the 84 SNPs and their flanking regions that were developed for use with Illumina's...

Methods for the design, implementation, and analysis of illumina infinium™ SNP assays in plants

Chagné, David
Bianco, Luca
Lawley, Cindy
Micheletti, Diego
Jacobs, Jeanne M. E.

January 2014

The advent of Next-Generation sequencing-by-synthesis technologies has fuelled SNP discovery, genoty...

Design of a Bovine Low-Density SNP Array Optimized for

Didier Boichard
Hoyoung Chung
Romain Dassonneville
Xavier David
Andre ́ Eggen
Kimberly J. Gietzen
Ben J. Hayes
Cynthia T. Lawley
Tad S. Sonstegard
Curtis P. Van Tassell
Paul M. Vanraden
Karine A. Viaud-martinez
George R. Wiggans
For The

August 2016

The Illumina BovineLD BeadChip was designed to support imputation to higher density genotypes in dai...

Design of a bovine low-density snp array optimized for imputation

Boichard, Didier
Chung, Hoyoung
Dassonneville, Romain
David, Xavier
Eggen, Andre
Fritz, Sebastien
Gietzen, Kimberly J.
Hayes, Ben J.
Lawley, Cynthia T.
Sonstegard, Tad S.
Van Tassell, Curtis P.
VanRaden, Paul M.
Viaud-Martinez, Karine A.
Wiggans, George R.

March 2012

The Illumina BovineLD BeadChip was designed to support imputation to higher density genotypes in dai...

Design of a bovine low-density SNP array optimized for imputation.

Didier Boichard
Hoyoung Chung
Romain Dassonneville
Xavier David
André Eggen
Sébastien Fritz
Kimberly J Gietzen
Ben J Hayes
Cynthia T Lawley
Tad S Sonstegard
Curtis P Van Tassell
Paul M VanRaden
Karine A Viaud-Martinez
George R Wiggans

The Illumina BovineLD BeadChip was designed to support imputation to higher density genotypes in dai...

RSBL-2012-0942_DeepSea_aDNA_IlluminaSeqs

Lejzerowicz, Franck
Esling, Philippe
Majewski, Wojciech
Szczuciński, Witold
Decelle, Johan
Obadia, Cyril
Martinez Arbizu, Pedro
Pawlowski, Jan

May 2013

DNA sequences generated by cloning/Sanger sequencing and by Illumina sequencing (MiSeq instrument). ...

Design of a Bovine Low-Density SNP Array Optimized for Imputation

Didier Boichard (121003)
Hoyoung Chung (175120)
Romain Dassonneville (175125)
Xavier David (175133)
André Eggen (47250)
Sébastien Fritz (175137)
Kimberly J. Gietzen (175145)
Ben J. Hayes (175151)
Cynthia T. Lawley (171073)
Tad S. Sonstegard (175161)
Curtis P. Van Tassell (175167)
Paul M. VanRaden (175174)
Karine A. Viaud-Martinez (175180)
George R. Wiggans (175183)

March 2012

<div><p>The Illumina BovineLD BeadChip was designed to support imputation to higher density genotype...

BeadArray-based genotyping.

Butler, H
Ragoussis, J

January 2008

There is a demand for technologies that allow the interrogation of large numbers of SNP polymorphism...

Velvet_Reference_protein_matching.txt

Kozak, Genevieve M.
Brennan, Reid S.
Berdan, Emma L.
Fuller, Rebecca C.
Whitehead, Andrew

August 2013

Sequences of our reference based on the Lucania parva velvet assembly (kmer=25) with a total of 24,7...

Genetics and population analysis R/Bioconductor software for Illumina’s Infinium whole-genome

Genotyping Beadchips
Matthew E. Ritchie
Benilton S. Carvalho
Kurt N. Hetrick
Simon Tavaré
Rafael A. Irizarry

August 2016

Summary: Illumina produces a number of microarray-based technologies for human genotyping. An Infini...

Performance of a multi-species-plant illumina beadchip

Le Paslier, Marie-Christine
Berard, Aurélie
Chauveau, Aurelie
Marquand, Elodie
Boland-Auge, Anne
Eggen, André
Brunel, Dominique
Faivre-Rampant, Patricia

January 2016

Since mid-2005, Illumina Infinium® genotyping arrays provide data with good accuracy for thousands o...

Genotype data for GWAS.xlsx

Lili Qi (6387485)

February 2019

Genotype data using the Illumina Infinium chip containing 8,723 bi-allelic SNP marker

Infinium Chip Souce Sequences

Abstract

Extracted data

Infinium Chip Souce Sequences

Abstract

Extracted data

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