Individual ancestry estimates obtained for the HGDP-CEPH reference samples and individuals tested from Brazilian populations using 46 AIM-Indels (AFR: Africa; EUR: Europe; NAM: Native American; SI: Santa Isabel do Rio Negro; MA: Manaus; BE: Belém; PE: Pernambuco; AL: Alagoas; MS: Mato Grosso do Sul; TE: Terena; MG: Minas Gerais; ES: Espírito Santo; RJ: Rio de Janeiro; SP: São Paulo; PR: Paraná; SC: Santa Catarina; RS: Rio Grande do Sul).
- Fernanda Saloum de Neves Manta (461294)
- Rui Pereira (187696)
- Romulo Vianna (461295)
- Alfredo Rodolfo Beuttenmüller de Araújo (461296)
- Daniel Leite Góes Gitaí (449816)
- Dayse Aparecida da Silva (401531)
- Eldamária de Vargas Wolfgramm (461297)
- Isabel da Mota Pontes (461298)
- José Ivan Aguiar (461299)
- Milton Ozório Moraes (202227)
- Elizeu Fagundes de Carvalho (401530)
- Leonor Gusmão (151951)
Publication date
September 2013
DOIAbstract
<p>Ancestry estimates were obtained using STRUCTURE, for the following options: k=3; 100,000 burnin steps followed by 100,000 MCMC iterations; Admixture model (<i>“Use population Information to test for migrants”</i>); and allele frequencies were correlated and updated using only individuals with POPFLAG=1.</p
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