<p>The degree of KIR diversity (expressed as the Simspon's Reciprocal Index) increased only in populations having specific KIRs (i.e., for ), whereas in populations with degenerate KIRs it remained close to its initial value, reflecting largely neutral drift. The time plot in (A) represents the KIR diversity in a population infected with an MHC-downregulating virus, and the time plot in (B) shows the KIR diversity in populations infected with viruses evolving decoy molecules. Each line represents the mean of the SRI score, i.e. averaged over 10 different simulations. The different colors represent the specificity values ranging from to bits. (C) Mean SRI score at the end of the simulation for each specificity value. There is a significant...
<p>A stretch of 14 kb DNA that interconnects KIR3DP1 and KIR2DL4 divides the KIR genotype into two h...
<p>Changes in the densities of different populations over time are plotted. Standard parameters (def...
<p>A.) Pairwise F<sub>ST</sub> of polymorphic sites. Each patient sample was treated as a population...
<p>A host population was inoculated with a wild type virus after a “burn in” period of years; we al...
<p>(A)–(B) Single representative simulations in a population infected with highly specific KIRs (i.e...
<p><b>(A)</b> Mean pairwise genetic diversity π is measured as the mean distance, measured in years,...
<p>Phylogenetic trees are based on samples of directly measured virus genealogy in the simulation, a...
Panel (a) shows the noisy behaviour of three genetic diversity statistics (y-axis) from an individua...
<p>A. Plotted is the total number of distinct viable receptor:ligand allotype pairs per individual. ...
<p>Panels in the upper row show averaged allele frequency dynamics over 25 generations after an alle...
(a) Trajectories of a set of four genetic diversity statistics over a ten year period at equilibrium...
(a) Probability Phard,s(2) of observing a single allele in a pair drawn from a subrange of size Ls f...
<p>Impact of population size on the maintenance of MHC polymorphism (upper panels) and heterozygosit...
<p>Each square represents a set of simulations with identical gene expression noise level and mutati...
Extensive allelic diversity in variable numbers of tandem repeats (VNTRs) has been discovered in the...
<p>A stretch of 14 kb DNA that interconnects KIR3DP1 and KIR2DL4 divides the KIR genotype into two h...
<p>Changes in the densities of different populations over time are plotted. Standard parameters (def...
<p>A.) Pairwise F<sub>ST</sub> of polymorphic sites. Each patient sample was treated as a population...
<p>A host population was inoculated with a wild type virus after a “burn in” period of years; we al...
<p>(A)–(B) Single representative simulations in a population infected with highly specific KIRs (i.e...
<p><b>(A)</b> Mean pairwise genetic diversity π is measured as the mean distance, measured in years,...
<p>Phylogenetic trees are based on samples of directly measured virus genealogy in the simulation, a...
Panel (a) shows the noisy behaviour of three genetic diversity statistics (y-axis) from an individua...
<p>A. Plotted is the total number of distinct viable receptor:ligand allotype pairs per individual. ...
<p>Panels in the upper row show averaged allele frequency dynamics over 25 generations after an alle...
(a) Trajectories of a set of four genetic diversity statistics over a ten year period at equilibrium...
(a) Probability Phard,s(2) of observing a single allele in a pair drawn from a subrange of size Ls f...
<p>Impact of population size on the maintenance of MHC polymorphism (upper panels) and heterozygosit...
<p>Each square represents a set of simulations with identical gene expression noise level and mutati...
Extensive allelic diversity in variable numbers of tandem repeats (VNTRs) has been discovered in the...
<p>A stretch of 14 kb DNA that interconnects KIR3DP1 and KIR2DL4 divides the KIR genotype into two h...
<p>Changes in the densities of different populations over time are plotted. Standard parameters (def...
<p>A.) Pairwise F<sub>ST</sub> of polymorphic sites. Each patient sample was treated as a population...