<p>Clustering results from the selected cut levels. Bilaterally symmetric clusters are displayed in the same figures using two different colors (blue and red). The large cluster went through further iteration is marked with a green box.</p
Illustration of the clustering results from SCG (red background), SCClone (blue background), BnpC (g...
<p>Left: Clustering score in dependence on the index of the used feature vectors. The colors indicat...
<p>A heat map displays z-score normalized and unsupervised hierarchical clustering for three infecti...
<p>Clusters are represented by different colors or types of marker. A) 7 actual clusters. B) Cluster...
<p>Clusters are represented by different colors or types of marker. A) 7 actual clusters. B) cluster...
<p>Different colors indicate different clusters, defined by a cut-off value of 0.25. (Note that colo...
Figure S2. Hierarchical STRUCTURE analysis identified clusters within each of the three major lineag...
<p>Clusters are represented by different colors or types of marker. A) 7 actual clusters. B) Cluster...
<p>Four examples of clusters are presented; for each, a phylogram and graphical representation of th...
<p>Each column represents one haplotype, the green and red colours show whether an isolate was assig...
<div><p>Dendrograms of complete linkage hierarchical cluster analyses based on the vector of contras...
(a) Dendrogram illustrating the results of hierarchical clustering. (b) Silhouette coefficients calc...
<p>Several clusters are labeled and identified through different colors. The large cluster, C20, rep...
Hierarchical clustering, where final nodes are the selected groups for classification.</p
<p>A correlation matrix together with clustering (i.e., Pearson uncentered) of the feature points is...
Illustration of the clustering results from SCG (red background), SCClone (blue background), BnpC (g...
<p>Left: Clustering score in dependence on the index of the used feature vectors. The colors indicat...
<p>A heat map displays z-score normalized and unsupervised hierarchical clustering for three infecti...
<p>Clusters are represented by different colors or types of marker. A) 7 actual clusters. B) Cluster...
<p>Clusters are represented by different colors or types of marker. A) 7 actual clusters. B) cluster...
<p>Different colors indicate different clusters, defined by a cut-off value of 0.25. (Note that colo...
Figure S2. Hierarchical STRUCTURE analysis identified clusters within each of the three major lineag...
<p>Clusters are represented by different colors or types of marker. A) 7 actual clusters. B) Cluster...
<p>Four examples of clusters are presented; for each, a phylogram and graphical representation of th...
<p>Each column represents one haplotype, the green and red colours show whether an isolate was assig...
<div><p>Dendrograms of complete linkage hierarchical cluster analyses based on the vector of contras...
(a) Dendrogram illustrating the results of hierarchical clustering. (b) Silhouette coefficients calc...
<p>Several clusters are labeled and identified through different colors. The large cluster, C20, rep...
Hierarchical clustering, where final nodes are the selected groups for classification.</p
<p>A correlation matrix together with clustering (i.e., Pearson uncentered) of the feature points is...
Illustration of the clustering results from SCG (red background), SCClone (blue background), BnpC (g...
<p>Left: Clustering score in dependence on the index of the used feature vectors. The colors indicat...
<p>A heat map displays z-score normalized and unsupervised hierarchical clustering for three infecti...
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