Phylogenetic tree based on neighbour-joining analysis of 78 HRV-A VP4/VP2 (A) and 14 HRV-B and 59 HRV-C VP4/VP2 (B) sequences from the present study and database reference strains.

Phylogeny of VP4/2 gene sequences amplified from study subjects and comparison with corresponding full length sequences of HRV-C and other samples where 5′UTR groups had been previously assigned [19].

Anne Wisdom (368202)
Aldona E. Kutkowska (368203)
E. Carol McWilliam Leitch (368204)
Eleanor Gaunt (368205)
Kate Templeton (368206)
Heli Harvala (368207)
Peter Simmonds (191583)

February 2013

Symbols identify HRV-Cc (ie. with species C-like 5′UTR sequences) or HRV-Ca (species A-lik...

Phylogenetic tree depicting the relationships among all 101 HRV serotypes in the P1-P2 region of 5'NCR.

Wai-Ming Lee (34816)
Christin Kiesner (34817)
Tressa Pappas (34818)
Iris Lee (34819)
Kris Grindle (34820)
Tuomas Jartti (34821)
Bogdan Jakiela (34822)
Robert F. Lemanske Jr. (153147)
Peter A. Shult (34824)
James E. Gern (34825)

February 2013

This tree was constructed using the neighbor joining method according to the distances (divergenc...

Phylogenetic trees of HRSV strains group A (A) and B (B), based on the second hypervariable region of G-gene as described by Peret et al [10]

Lorena I. Tapia (535072)
Chad A. Shaw (94130)
Letisha O. Aideyan (535073)
Alan M. Jewell (535074)
Brian C. Dawson (535075)
Taha R. Haq (535076)
Pedro A. Piedra (535077)

March 2014

. Selected worldwide previously described sequences (color), were retrieved from GenBank and comp...

Phylogenetic tree based on neighbour-joining analysis including Italian HRV-A78 (A), HRV-A12 (B), HRV-A22 (C), HRV-B86 (D), HRV-B48 (E), HRV-Cpat10 (F), HRV-C23 (G)-like strain sequences in comparison with the most closely related sequences found in GenBank.

Cristina Daleno (397768)
Antonio Piralla (120455)
Alessia Scala (397769)
Laura Senatore (486831)
Nicola Principi (397771)
Susanna Esposito (397772)

November 2013

The coloured dots indicate the sampling season: blue, 2007-2008; green, 2008-2009; pink, 2009-201...

Phylogenetic tree depicting relationships between known and novel HRVs based on VP4/VP2 gene analysis.

Ting Huang (190932)
Wei Wang (17594)
Mael Bessaud (5653756)
Peijun Ren (371445)
Jun Sheng (139486)
Huajie Yan (371446)
Jing Zhang (23775)
Xin Lin (149944)
Yongjin Wang (371447)
Francis Delpeyroux (67572)
Vincent Deubel (204926)

February 2013

Grouping of HRV reference serotypes (designated R#), previously published novel HRV strains QPM f...

Phylogenetic analysis of CVA10 strains detected in this study and reference strains based on partial VP1 sequences.

Wan-Yu Chung (439059)
Pai-Shan Chiang (183435)
Shu-Ting Luo (183441)
Tzou-Yien Lin (110829)
Kuo-Chien Tsao (110815)
Min-Shi Lee (183427)

December 2016

The reference strains were selected based on geographical and chronological distributions. The ph...

Phylogenetic analysis of representative HRSV in epidemic season 2012/13.

Rungnapa Malasao (822905)
Michiko Okamoto (461195)
Natthawan Chaimongkol (822906)
Tadatsugu Imamura (461194)
Kentaro Tohma (399417)
Isolde Dapat (822907)
Clyde Dapat (155317)
Akira Suzuki (178307)
Mayuko Saito (43893)
Mariko Saito (339975)
Raita Tamaki (339974)
Gay Anne Granada Pedrera-Rico (822908)
Rapunzel Aniceto (339976)
Reynaldo Frederick Negosa Quicho (822909)
Edelwisa Segubre-Mercado (257809)
Socorro Lupisan (339971)
Hitoshi Oshitani (178316)

November 2015

(A) Phylogenetic tree of HRSV-A based on the nucleotide sequences of the second hypervariable reg...

Phylogenetic tree depicting relationships between known and novel HRVs based on 5’UTR analysis.

Ting Huang (190932)
Wei Wang (17594)
Mael Bessaud (5653756)
Peijun Ren (371445)
Jun Sheng (139486)
Huajie Yan (371446)
Jing Zhang (23775)
Xin Lin (149944)
Yongjin Wang (371447)
Francis Delpeyroux (67572)
Vincent Deubel (204926)

February 2013

Grouping of HRV reference serotypes (designated R#), previously published novel HRV strains (desi...

Phylogenetic analysis of EV71 strains detected in this study and reference strains based on partial VP1 sequences.

Wan-Yu Chung (439059)
Pai-Shan Chiang (183435)
Shu-Ting Luo (183441)
Tzou-Yien Lin (110829)
Kuo-Chien Tsao (110815)
Min-Shi Lee (183427)

December 2016

The reference strains were selected based on geographical and chronological distributions. The ph...

Phylogenetic tree of HRSV-A strains.

Lieselot Houspie (114391)
Philippe Lemey (30422)
Els Keyaerts (400076)
Eva Reijmen (400077)
Valentijn Vergote (400078)
Anne Vankeerberghen (400079)
Freya Vaeyens (400080)
Hans De Beenhouwer (400081)
Marc Van Ranst (30434)

April 2013

The phylogenetic tree was constructed based on a 624-nucleotide fragment of the G protein, consis...

Phylogenetic analysis of VP1-P2C region from outbreak and sporadic HAV strains.

Gilberto Vaughan (363289)
Guoliang Xia (136298)
Joseph C. Forbi (346700)
Michael A. Purdy (168868)
Lívia Maria Gonçalves Rossi (480764)
Philip R. Spradling (480765)
Yury E. Khudyakov (168882)

November 2013

Phylogenetic analysis of the HAV VP1-P2C region was performed using all HAV outbreak strains. Sam...

Phylogenetic trees constructed based on the entire VP1 nucleotide sequences of CV-A2 strains isolated between 1947 and 2017.

Qian Yang (300330)
Xinrui Gu (3605918)
Yong Zhang (5893)
Haiyan Wei (1613839)
Qi Li (67548)
Huan Fan (487588)
Yi Xu (131145)
Jie Li (15030)
Zhaolin Tan (5775332)
Yang Song (88132)
Dongmei Yan (195489)
Tianjiao Ji (1396918)
Shuangli Zhu (195480)
Wenbo Xu (148718)

September 2018

The CV-A2 strains isolated in the present study are indicated by solid circles. Numbers at the nodes...

Phylogenetic tree of HRSV-B strains.

Lieselot Houspie (114391)
Philippe Lemey (30422)
Els Keyaerts (400076)
Eva Reijmen (400077)
Valentijn Vergote (400078)
Anne Vankeerberghen (400079)
Freya Vaeyens (400080)
Hans De Beenhouwer (400081)
Marc Van Ranst (30434)

April 2013

The phylogenetic tree was constructed based on a 708–762-nucleotide fragment of the G protein, co...

Phylogenetic relationships among genotype 1a strains.

Alex O. Martínez-Torres (3117957)
María M. Mosquera (3117954)
Fernando De Ory (211298)
Alejandro González-Praetorius (3117951)
Juan E. Echevarría (200355)

September 2016

The phylogenetic tree was obtained by Neighbor-Joining analysis. (Black circle), reference strain...

Phylogenetic analysis of full-length VP1 region of EVD68 strains.

Juan Du (118107)
Baisong Zheng (694844)
Wenwen Zheng (626018)
Peng Li (69518)
Jian Kang (118630)
Jingwei Hou (832762)
Richard Markham (552206)
Ke Zhao (248186)
Xiao-Fang Yu (248189)

December 2015

117 full-length EVD68 VP1 sequences were used for the re-construction of the Neighbor-Joining tre...

Phylogeny of VP4/2 gene sequences amplified from study subjects and comparison with corresponding full length sequences of HRV-C and other samples where 5′UTR groups had been previously assigned [19].

Anne Wisdom (368202)
Aldona E. Kutkowska (368203)
E. Carol McWilliam Leitch (368204)
Eleanor Gaunt (368205)
Kate Templeton (368206)
Heli Harvala (368207)
Peter Simmonds (191583)

February 2013

Symbols identify HRV-Cc (ie. with species C-like 5′UTR sequences) or HRV-Ca (species A-lik...

Phylogenetic tree depicting the relationships among all 101 HRV serotypes in the P1-P2 region of 5'NCR.

Wai-Ming Lee (34816)
Christin Kiesner (34817)
Tressa Pappas (34818)
Iris Lee (34819)
Kris Grindle (34820)
Tuomas Jartti (34821)
Bogdan Jakiela (34822)
Robert F. Lemanske Jr. (153147)
Peter A. Shult (34824)
James E. Gern (34825)

February 2013

This tree was constructed using the neighbor joining method according to the distances (divergenc...

Phylogenetic trees of HRSV strains group A (A) and B (B), based on the second hypervariable region of G-gene as described by Peret et al [10]

Lorena I. Tapia (535072)
Chad A. Shaw (94130)
Letisha O. Aideyan (535073)
Alan M. Jewell (535074)
Brian C. Dawson (535075)
Taha R. Haq (535076)
Pedro A. Piedra (535077)

March 2014

. Selected worldwide previously described sequences (color), were retrieved from GenBank and comp...

Phylogenetic tree based on neighbour-joining analysis including Italian HRV-A78 (A), HRV-A12 (B), HRV-A22 (C), HRV-B86 (D), HRV-B48 (E), HRV-Cpat10 (F), HRV-C23 (G)-like strain sequences in comparison with the most closely related sequences found in GenBank.

Cristina Daleno (397768)
Antonio Piralla (120455)
Alessia Scala (397769)
Laura Senatore (486831)
Nicola Principi (397771)
Susanna Esposito (397772)

November 2013

The coloured dots indicate the sampling season: blue, 2007-2008; green, 2008-2009; pink, 2009-201...

Phylogenetic tree depicting relationships between known and novel HRVs based on VP4/VP2 gene analysis.

Ting Huang (190932)
Wei Wang (17594)
Mael Bessaud (5653756)
Peijun Ren (371445)
Jun Sheng (139486)
Huajie Yan (371446)
Jing Zhang (23775)
Xin Lin (149944)
Yongjin Wang (371447)
Francis Delpeyroux (67572)
Vincent Deubel (204926)

February 2013

Grouping of HRV reference serotypes (designated R#), previously published novel HRV strains QPM f...

Phylogenetic analysis of CVA10 strains detected in this study and reference strains based on partial VP1 sequences.

Wan-Yu Chung (439059)
Pai-Shan Chiang (183435)
Shu-Ting Luo (183441)
Tzou-Yien Lin (110829)
Kuo-Chien Tsao (110815)
Min-Shi Lee (183427)

December 2016

The reference strains were selected based on geographical and chronological distributions. The ph...

Phylogenetic analysis of representative HRSV in epidemic season 2012/13.

Rungnapa Malasao (822905)
Michiko Okamoto (461195)
Natthawan Chaimongkol (822906)
Tadatsugu Imamura (461194)
Kentaro Tohma (399417)
Isolde Dapat (822907)
Clyde Dapat (155317)
Akira Suzuki (178307)
Mayuko Saito (43893)
Mariko Saito (339975)
Raita Tamaki (339974)
Gay Anne Granada Pedrera-Rico (822908)
Rapunzel Aniceto (339976)
Reynaldo Frederick Negosa Quicho (822909)
Edelwisa Segubre-Mercado (257809)
Socorro Lupisan (339971)
Hitoshi Oshitani (178316)

November 2015

(A) Phylogenetic tree of HRSV-A based on the nucleotide sequences of the second hypervariable reg...

Phylogenetic tree depicting relationships between known and novel HRVs based on 5’UTR analysis.

Ting Huang (190932)
Wei Wang (17594)
Mael Bessaud (5653756)
Peijun Ren (371445)
Jun Sheng (139486)
Huajie Yan (371446)
Jing Zhang (23775)
Xin Lin (149944)
Yongjin Wang (371447)
Francis Delpeyroux (67572)
Vincent Deubel (204926)

February 2013

Grouping of HRV reference serotypes (designated R#), previously published novel HRV strains (desi...

Phylogenetic analysis of EV71 strains detected in this study and reference strains based on partial VP1 sequences.

Wan-Yu Chung (439059)
Pai-Shan Chiang (183435)
Shu-Ting Luo (183441)
Tzou-Yien Lin (110829)
Kuo-Chien Tsao (110815)
Min-Shi Lee (183427)

December 2016

The reference strains were selected based on geographical and chronological distributions. The ph...

Phylogenetic tree of HRSV-A strains.

Lieselot Houspie (114391)
Philippe Lemey (30422)
Els Keyaerts (400076)
Eva Reijmen (400077)
Valentijn Vergote (400078)
Anne Vankeerberghen (400079)
Freya Vaeyens (400080)
Hans De Beenhouwer (400081)
Marc Van Ranst (30434)

April 2013

The phylogenetic tree was constructed based on a 624-nucleotide fragment of the G protein, consis...

Phylogenetic analysis of VP1-P2C region from outbreak and sporadic HAV strains.

Gilberto Vaughan (363289)
Guoliang Xia (136298)
Joseph C. Forbi (346700)
Michael A. Purdy (168868)
Lívia Maria Gonçalves Rossi (480764)
Philip R. Spradling (480765)
Yury E. Khudyakov (168882)

November 2013

Phylogenetic analysis of the HAV VP1-P2C region was performed using all HAV outbreak strains. Sam...

Phylogenetic trees constructed based on the entire VP1 nucleotide sequences of CV-A2 strains isolated between 1947 and 2017.

Qian Yang (300330)
Xinrui Gu (3605918)
Yong Zhang (5893)
Haiyan Wei (1613839)
Qi Li (67548)
Huan Fan (487588)
Yi Xu (131145)
Jie Li (15030)
Zhaolin Tan (5775332)
Yang Song (88132)
Dongmei Yan (195489)
Tianjiao Ji (1396918)
Shuangli Zhu (195480)
Wenbo Xu (148718)

September 2018

The CV-A2 strains isolated in the present study are indicated by solid circles. Numbers at the nodes...

Phylogenetic tree of HRSV-B strains.

Lieselot Houspie (114391)
Philippe Lemey (30422)
Els Keyaerts (400076)
Eva Reijmen (400077)
Valentijn Vergote (400078)
Anne Vankeerberghen (400079)
Freya Vaeyens (400080)
Hans De Beenhouwer (400081)
Marc Van Ranst (30434)

April 2013

The phylogenetic tree was constructed based on a 708–762-nucleotide fragment of the G protein, co...

Phylogenetic relationships among genotype 1a strains.

Alex O. Martínez-Torres (3117957)
María M. Mosquera (3117954)
Fernando De Ory (211298)
Alejandro González-Praetorius (3117951)
Juan E. Echevarría (200355)

September 2016

The phylogenetic tree was obtained by Neighbor-Joining analysis. (Black circle), reference strain...

Phylogenetic analysis of full-length VP1 region of EVD68 strains.

Juan Du (118107)
Baisong Zheng (694844)
Wenwen Zheng (626018)
Peng Li (69518)
Jian Kang (118630)
Jingwei Hou (832762)
Richard Markham (552206)
Ke Zhao (248186)
Xiao-Fang Yu (248189)

December 2015

117 full-length EVD68 VP1 sequences were used for the re-construction of the Neighbor-Joining tre...

Phylogeny of VP4/2 gene sequences amplified from study subjects and comparison with corresponding full length sequences of HRV-C and other samples where 5′UTR groups had been previously assigned [19].

Anne Wisdom (368202)
Aldona E. Kutkowska (368203)
E. Carol McWilliam Leitch (368204)
Eleanor Gaunt (368205)
Kate Templeton (368206)
Heli Harvala (368207)
Peter Simmonds (191583)

February 2013

Symbols identify HRV-Cc (ie. with species C-like 5′UTR sequences) or HRV-Ca (species A-lik...

Phylogenetic tree depicting the relationships among all 101 HRV serotypes in the P1-P2 region of 5'NCR.

Wai-Ming Lee (34816)
Christin Kiesner (34817)
Tressa Pappas (34818)
Iris Lee (34819)
Kris Grindle (34820)
Tuomas Jartti (34821)
Bogdan Jakiela (34822)
Robert F. Lemanske Jr. (153147)
Peter A. Shult (34824)
James E. Gern (34825)

February 2013

This tree was constructed using the neighbor joining method according to the distances (divergenc...

Phylogenetic trees of HRSV strains group A (A) and B (B), based on the second hypervariable region of G-gene as described by Peret et al [10]

Lorena I. Tapia (535072)
Chad A. Shaw (94130)
Letisha O. Aideyan (535073)
Alan M. Jewell (535074)
Brian C. Dawson (535075)
Taha R. Haq (535076)
Pedro A. Piedra (535077)

March 2014

. Selected worldwide previously described sequences (color), were retrieved from GenBank and comp...

Phylogenetic tree based on neighbour-joining analysis of 78 HRV-A VP4/VP2 (A) and 14 HRV-B and 59 HRV-C VP4/VP2 (B) sequences from the present study and database reference strains.

Abstract

Extracted data

Phylogenetic tree based on neighbour-joining analysis of 78 HRV-A VP4/VP2 (A) and 14 HRV-B and 59 HRV-C VP4/VP2 (B) sequences from the present study and database reference strains.

Abstract

Extracted data

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