<p>Red lines show performance of Top<i>k</i>Net integrating algorithms that are optimal for a dataset with high-similarity, while green lines show that with low-similarity. Blue lines show performance of Top<i>k</i>Net integrating top 10 highest-performance algorithms. Dashed lines in red, green, and blue represent performance of community prediction integrating algorithms that are optimal for a dataset with high-similarity, that with low-similarity, and top 10 highest-performance algorithms, respectively. (<b>A</b>) AUC-PR for <i>E. coli</i> dataset. (<b>B</b>) AUC-ROC for <i>E. coli</i> dataset. (<b>C</b>) Max f-score for <i>E. coli</i> dataset. (<b>D</b>) AUC-PR for <i>S. cerevisiae</i> dataset. (<b>E</b>) AUC-ROC for <i>S. cerevisiae</i...
<p>(A) The integrated network is constructed from String and HumanNet; (B) The integrated network is...
Motivation: Inferring a gene regulatory network exclusively from microarray expression profiles is a...
<p>Only the algorithms that significantly predict the functional data are included. Note that in man...
<p>Black squares and lines show performances of Top<i>k</i>Net algorithm. For example, values at <i>...
<p>Black squares and lines show performances of Top<i>k</i>Net algorithm. For example, values at <i>...
<p>(<b>A</b>) Datasets. Expression datasets were split into a dataset for which optimal algorithms a...
<p>H and L represent high-diversity and low-diversity algorithm pairs, respectively. (<b>A</b>) Box-...
MOTIVATION: Network-based gene function inference methods have proliferated in recent years, but mea...
<p>The scatter plots show correlation of algorithm distance between two gene-expression datasets. Ea...
<p>The precision-recall curve (A), receiver operating characteristic curve (B), the significance lev...
<p><b>A.</b> Comparison based on fold enrichment of true edges in the inferred network. The cartoon ...
<p>(<b>a</b>) Target Network. Circles and links are genes and regulatory links among genes, respecti...
© De Gruyter 2014. Graphical models are widely used to study complex multivariate biological systems...
Elucidating gene regulatory network (GRN) from large scale experimental data remains a central chall...
The development of algorithms solving computationally hard optimisation problems has a long history....
<p>(A) The integrated network is constructed from String and HumanNet; (B) The integrated network is...
Motivation: Inferring a gene regulatory network exclusively from microarray expression profiles is a...
<p>Only the algorithms that significantly predict the functional data are included. Note that in man...
<p>Black squares and lines show performances of Top<i>k</i>Net algorithm. For example, values at <i>...
<p>Black squares and lines show performances of Top<i>k</i>Net algorithm. For example, values at <i>...
<p>(<b>A</b>) Datasets. Expression datasets were split into a dataset for which optimal algorithms a...
<p>H and L represent high-diversity and low-diversity algorithm pairs, respectively. (<b>A</b>) Box-...
MOTIVATION: Network-based gene function inference methods have proliferated in recent years, but mea...
<p>The scatter plots show correlation of algorithm distance between two gene-expression datasets. Ea...
<p>The precision-recall curve (A), receiver operating characteristic curve (B), the significance lev...
<p><b>A.</b> Comparison based on fold enrichment of true edges in the inferred network. The cartoon ...
<p>(<b>a</b>) Target Network. Circles and links are genes and regulatory links among genes, respecti...
© De Gruyter 2014. Graphical models are widely used to study complex multivariate biological systems...
Elucidating gene regulatory network (GRN) from large scale experimental data remains a central chall...
The development of algorithms solving computationally hard optimisation problems has a long history....
<p>(A) The integrated network is constructed from String and HumanNet; (B) The integrated network is...
Motivation: Inferring a gene regulatory network exclusively from microarray expression profiles is a...
<p>Only the algorithms that significantly predict the functional data are included. Note that in man...