Principal component analysis of the 5-mer frequency in the 136 nucleotide sequences of the 15 <i>Bursaphelenchus xylophilus</i> isolates (Bx), determined by the alignment-independent bi-linear multivariate modelling (AIBIMM) approach.
- Joana Figueiredo (176254)
- Maria José Simões (504040)
- Paula Gomes (181708)
- Cristina Barroso (504041)
- Diogo Pinho (504042)
- Luci Conceição (504043)
- Luís Fonseca (5651308)
- Isabel Abrantes (281006)
- Miguel Pinheiro (8053)
- Conceição Egas (236825)
Publication date
December 2013
DOIAbstract
<p>The legend on each axis indicates the variances (%) for principal components 1 and 2. The group Pt/M/K (closed orange circle) represents the Portuguese isolates from the initial outbreak, BxPt15SC, BxPt17AS, M - isolates from Madeira Island, BxMad4SV, BxMad16S, and K the two Korean isolates, BxKBG and BxKAS. Pt (open orange circle) represents the isolates from the 2008 outbreak in the central region of Portugal, BxPt19SCD and BxPt21T. Ch (green diamond) represents Chinese isolates BxChJS and BxChSD; J (purple squares) represents the Japanese isolates BxJ10, BxJS10, BxJT4, and finally USA (light blue triangles) represents BXUSA618 and BxUSA745.</p
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