<p>Variants are labelled according to DNApol identifier initially, followed by the MCP variant number in brackets. In order to slightly reduce the number of combinations of sequences, where individual gene phylogenies show a clear separation of individual variants, these are concatenated together and excluded from the other combinations. Single value node labels represent ML bootstrap values. Where nodes are labelled with two values, this indicates that both ML and Bayesian topologies agree (whole numbers represent ML bootstrap values, decimals indicate Bayesian posterior probability). Sub-group A viruses are labelled in blue, sub-group B viruses are red and the intermediate Flex virus variant is green. Bold values are those greater than 75...
<p>The numbers at the internal nodes represent significant bootstrap support values, determined from...
Red sequences are related to the vaccines, blue sequences are those identified in the current study....
<p>Time-calibrated maximum clade credibility trees (MCCT) of HIV-1 BF and B clades identified in the...
<p>Single value node labels represent ML bootstrap values. Where nodes are labelled with two values,...
<p>The maximum likelihood (ML) tree was generated based on the concatenated protein sequences of 37 ...
(A) A closer look at the clade containing all DENV-1 sequenced from our study site (marked by star) ...
<p>Maximum likelihood phylogeny and bootstrap support values based on 1000 pseudoreplicates of the a...
<p>: variant in DNA sequence (HG003317 - HG003355) with amino acid variation indicated in parenthese...
<p>The two lineages with probability support of 1 were colored green and red respectively. The proba...
<p>Nodes encircled by black dots indicate codivergence events. Values near the nodes of the DdDp ind...
<p>Red letters correspond to putative pmpH-recombinant variants described in this study. Bold letter...
<p>The tree was constructed with the maximum likelihood algorithm implemented in PhyML and rooted on...
<p>Relationship was inferred by Bayesian analysis of the protein sequence alignment. A WAG model of ...
<p>The orange and blue colored branches represent one lineage while pink colored branches represents...
<p>Maximum likelihood trees were constructed based on the nucleotide sequences of the S segment, M s...
<p>The numbers at the internal nodes represent significant bootstrap support values, determined from...
Red sequences are related to the vaccines, blue sequences are those identified in the current study....
<p>Time-calibrated maximum clade credibility trees (MCCT) of HIV-1 BF and B clades identified in the...
<p>Single value node labels represent ML bootstrap values. Where nodes are labelled with two values,...
<p>The maximum likelihood (ML) tree was generated based on the concatenated protein sequences of 37 ...
(A) A closer look at the clade containing all DENV-1 sequenced from our study site (marked by star) ...
<p>Maximum likelihood phylogeny and bootstrap support values based on 1000 pseudoreplicates of the a...
<p>: variant in DNA sequence (HG003317 - HG003355) with amino acid variation indicated in parenthese...
<p>The two lineages with probability support of 1 were colored green and red respectively. The proba...
<p>Nodes encircled by black dots indicate codivergence events. Values near the nodes of the DdDp ind...
<p>Red letters correspond to putative pmpH-recombinant variants described in this study. Bold letter...
<p>The tree was constructed with the maximum likelihood algorithm implemented in PhyML and rooted on...
<p>Relationship was inferred by Bayesian analysis of the protein sequence alignment. A WAG model of ...
<p>The orange and blue colored branches represent one lineage while pink colored branches represents...
<p>Maximum likelihood trees were constructed based on the nucleotide sequences of the S segment, M s...
<p>The numbers at the internal nodes represent significant bootstrap support values, determined from...
Red sequences are related to the vaccines, blue sequences are those identified in the current study....
<p>Time-calibrated maximum clade credibility trees (MCCT) of HIV-1 BF and B clades identified in the...