<p>(a) Protein interface and interface clusters evaluation during years. (b) Distribution of protein interface cluster sizes throughout years. While the number of protein interface clusters is increasing, the cluster sizes are getting denser. The largest cluster in 1999 had 238 members that increased to 1361 in 2011. The minimum cluster size criterion is used to stop the algorithm in order to prevent the network nodes as network size of 1. During separation of the networks, for example, if one of the networks divided into two networks which have 4 and 6 nodes respectively, the algorithm only tries to divide the network which is above 5 (if it is possible) because the other network reached its final state according to our stopping criterion....
International audienceBACKGROUND: Protein interactions are crucial components of all cellular proces...
<p>(A) Absolute values of the clustering coefficient (blue circles, left axis) and mean path length...
<p>As we increase the minimal accepted confidence (cutoff) for the PPI data of the STRING database, ...
Protein-protein interactions occur in nature and have different functions. The interacting surface b...
International audienceAims/ Objectives: A protein-protein interaction network is considered as a sim...
In Bioinformatics, choosing the right algorithm for a problem is very important. Choosing the wrong ...
<p>(a) Community structure. (b) Node and edge representation in protein interface network. (c) The n...
The diverse range of cellular functions is performed by a limited number of protein folds existing i...
Colors correspond to different values of kmin. The plot shows that kmin = 4 was the lowest value to ...
The goal of network clustering algorithms is to detect dense clusters in a network, which provides a...
<p>The number of vertices (genes) and edges (interactions) in each network, the number of interactio...
The increasing availability of protein-protein interaction graphs (PPI) requires new efficient tools...
Abstract: The increasing availability of protein-protein interaction graphs (PPI) requires new effic...
<p>Length of lines represents the normalized number of multi-interface proteins at each classificati...
\u3cp\u3eThis paper introduces an algorithm for network community detection called DEEN (Delete Edge...
International audienceBACKGROUND: Protein interactions are crucial components of all cellular proces...
<p>(A) Absolute values of the clustering coefficient (blue circles, left axis) and mean path length...
<p>As we increase the minimal accepted confidence (cutoff) for the PPI data of the STRING database, ...
Protein-protein interactions occur in nature and have different functions. The interacting surface b...
International audienceAims/ Objectives: A protein-protein interaction network is considered as a sim...
In Bioinformatics, choosing the right algorithm for a problem is very important. Choosing the wrong ...
<p>(a) Community structure. (b) Node and edge representation in protein interface network. (c) The n...
The diverse range of cellular functions is performed by a limited number of protein folds existing i...
Colors correspond to different values of kmin. The plot shows that kmin = 4 was the lowest value to ...
The goal of network clustering algorithms is to detect dense clusters in a network, which provides a...
<p>The number of vertices (genes) and edges (interactions) in each network, the number of interactio...
The increasing availability of protein-protein interaction graphs (PPI) requires new efficient tools...
Abstract: The increasing availability of protein-protein interaction graphs (PPI) requires new effic...
<p>Length of lines represents the normalized number of multi-interface proteins at each classificati...
\u3cp\u3eThis paper introduces an algorithm for network community detection called DEEN (Delete Edge...
International audienceBACKGROUND: Protein interactions are crucial components of all cellular proces...
<p>(A) Absolute values of the clustering coefficient (blue circles, left axis) and mean path length...
<p>As we increase the minimal accepted confidence (cutoff) for the PPI data of the STRING database, ...