Calculates nucleotide diversity for each population from a STACKS haplotype export file. Run via a bash script in python 2.7.3. For more information, please contact nathanieldchu@gmail.co
Diversity statistics calculated from haplotype data. See README for indepth explanation
<p>Number of individuals sequenced (n), haplotypes (h), haplotypic (Hd) and nucleotidic (π) diversit...
Although various computer tools have been elaborately developed to calculate a series of statistics ...
Calculates nucleotide diversity for each population from a STACKS haplotype export file. Run via a b...
Calculates Fst values between pairs of populations based on a molecular diversity procedure from Hud...
Extracts STACKS that contain SNPs fixed between two groups, where at least a certain number of popul...
Calculates Fst per population using a bionomial procedure as in Hohenlohe 2010. Accepts a STACKS hap...
<p>Calculated nucleotide diversity (π± standard deviation) between individual TPE strains and the FB...
<p>Estimate of Nucleotide Diversity per Base Pair and Test of Neutral for HTL gene.</p
<p>Estimate of Nucleotide Diversity per Base Pair and Test of Neutral for Nam1 gene.</p
The nucleotide diversity (Pi) calculated for the chloroplast genomes of Cinnamomum species.</p
<p>Calculated nucleotide diversity (π± standard deviation) between FB isolate and individual TPA str...
<p>Calculated nucleotide diversity (π ± standard deviation) between TPA and TPE strains, within indi...
<p>Nucleotide diversity and haplotype diversity in the 20 sequenced true-to-type pummelos.</p
A method for estimating the nucleotide diversity from AFLP data is developed by using the relationsh...
Diversity statistics calculated from haplotype data. See README for indepth explanation
<p>Number of individuals sequenced (n), haplotypes (h), haplotypic (Hd) and nucleotidic (π) diversit...
Although various computer tools have been elaborately developed to calculate a series of statistics ...
Calculates nucleotide diversity for each population from a STACKS haplotype export file. Run via a b...
Calculates Fst values between pairs of populations based on a molecular diversity procedure from Hud...
Extracts STACKS that contain SNPs fixed between two groups, where at least a certain number of popul...
Calculates Fst per population using a bionomial procedure as in Hohenlohe 2010. Accepts a STACKS hap...
<p>Calculated nucleotide diversity (π± standard deviation) between individual TPE strains and the FB...
<p>Estimate of Nucleotide Diversity per Base Pair and Test of Neutral for HTL gene.</p
<p>Estimate of Nucleotide Diversity per Base Pair and Test of Neutral for Nam1 gene.</p
The nucleotide diversity (Pi) calculated for the chloroplast genomes of Cinnamomum species.</p
<p>Calculated nucleotide diversity (π± standard deviation) between FB isolate and individual TPA str...
<p>Calculated nucleotide diversity (π ± standard deviation) between TPA and TPE strains, within indi...
<p>Nucleotide diversity and haplotype diversity in the 20 sequenced true-to-type pummelos.</p
A method for estimating the nucleotide diversity from AFLP data is developed by using the relationsh...
Diversity statistics calculated from haplotype data. See README for indepth explanation
<p>Number of individuals sequenced (n), haplotypes (h), haplotypic (Hd) and nucleotidic (π) diversit...
Although various computer tools have been elaborately developed to calculate a series of statistics ...
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