Phylogenetic tree based on VP1 sequences of CVA4, CVA10 and CVA16 among Shandong isolates and reference strains.

Phylogenetic tree based on neighbour-joining analysis of 78 HRV-A VP4/VP2 (A) and 14 HRV-B and 59 HRV-C VP4/VP2 (B) sequences from the present study and database reference strains.

Cristina Daleno (397768)
Antonio Piralla (120455)
Alessia Scala (397769)
Laura Senatore (486831)
Nicola Principi (397771)
Susanna Esposito (397772)

November 2013

The coloured dots indicate the sampling season: blue, 2007-2008; green, 2008-2009; pink, 2009-201...

Phylogenetic analysis of P2 and P3 regions of eight circulating Changchun CV-A16 strains.

Wei Wei (21173)
Haoran Guo (433038)
Jingliang Li (552203)
Sangsang Ren (552204)
Zhenhong Wei (433039)
Wanguo Bao (327991)
Xiaoming Hu (552205)
Ke Zhao (248186)
Wenyan Zhang (327993)
Yulai Zhou (460655)
Fei Sun (102854)
Richard Markham (552206)
Xiao-Fang Yu (248189)

April 2014

(A) Phylogenetic analysis of the P2 and P3 sequences of circulating CV-A16 stains (nucleotides 33...

Phylogenetic analysis of the partial NS5B ORF sequences from EqHV.

Gang Lu (19958)
Lingshuang Sun (2793334)
Tao Xu (3537)
Dong He (553311)
Zengchao Wang (2793325)
Shudan Ou (2793328)
Kun Jia (747683)
Liguo Yuan (2793331)
Shoujun Li (572627)

May 2016

The field strains from China are indicated in green. Two distinct lineages for clades 1 and 2 are...

Phylogenetic tree based on CVB1 VP1 sequences of Shandong isolates and global strains.

Zexin Tao (502134)
Haiyan Wang (25821)
Yan Li (23143)
Guifang Liu (516591)
Aiqiang Xu (148695)
Xiaojuan Lin (267520)
Lizhi Song (148709)
Feng Ji (525838)
Suting Wang (502136)
Ning Cui (502137)
Yanyan Song (408130)

February 2014

Circles indicate strains obtained in this study, triangles indicate Shandong AFP strains.</p

Phylogenetic tree based on the entire VP1 nucleotide sequences (852 bp) of the CVB3 strains.

Huifang Tian (285755)
Yong Zhang (5893)
Qiang Sun (225630)
Shuangli Zhu (195480)
Xiujuan Li (403680)
Zhuo Pan (505122)
Wenbo Xu (148718)
Baohong Xu (505123)

January 2014

12 CVB3 isolates from this study and 46 CVB3 strains worldwide were used to build the tree. Boots...

Phylogenetic analyses of the six Inner Mongolia CVB4 strains and reference strains from GenBank using the 852-bp VP1 region sequence.

Xiaoling Tian (529803)
Yong Zhang (5893)
Suyi Gu (169631)
Yaochun Fan (529804)
Qiang Sun (225630)
Bo Zhang (6559)
Shaohong Yan (529805)
Wenbo Xu (148718)
Xueen Ma (529806)
Wenrui Wang (529807)

March 2014

The strains indicated by blue squares are the CVB4 strains isolated in this study; the strain ind...

Phylogenetic tree based on complete genome of Chinese mainland EV71.

Yan Zhang (8098)
Xiaojuan Tan (195499)
Aili Cui (203513)
Naiying Mao (282774)
Songtao Xu (169593)
Zhen Zhu (104773)
Jianhui Zhou (141895)
Jing Shi (16730)
Yueping Zhao (282775)
Xianjun Wang (132239)
Xueyong Huang (149227)
Shuangli Zhu (195480)
Yong Zhang (5893)
Wei Tang (53470)
Hua Ling (235402)
Wenbo Xu (148718)

February 2013

Red dots indicate the sequences from Mainland China and blue triangles indicate the sequences dow...

Phylogenetic analysis of the 5′UTR and P1 regions of eight circulating Changchun CV-A16 strains.

Wei Wei (21173)
Haoran Guo (433038)
Jingliang Li (552203)
Sangsang Ren (552204)
Zhenhong Wei (433039)
Wanguo Bao (327991)
Xiaoming Hu (552205)
Ke Zhao (248186)
Wenyan Zhang (327993)
Yulai Zhou (460655)
Fei Sun (102854)
Richard Markham (552206)
Xiao-Fang Yu (248189)

April 2014

(A) The neighbor-joining tree was generated based on the 5′UTR sequences (nucleotide 24–718 using...

Phylogenetic trees constructed based on the entire VP1 nucleotide sequences of CV-A2 strains isolated between 1947 and 2017.

Qian Yang (300330)
Xinrui Gu (3605918)
Yong Zhang (5893)
Haiyan Wei (1613839)
Qi Li (67548)
Huan Fan (487588)
Yi Xu (131145)
Jie Li (15030)
Zhaolin Tan (5775332)
Yang Song (88132)
Dongmei Yan (195489)
Tianjiao Ji (1396918)
Shuangli Zhu (195480)
Wenbo Xu (148718)

September 2018

The CV-A2 strains isolated in the present study are indicated by solid circles. Numbers at the nodes...

Phylogenetic trees constructed based on the P1 (a), P2 (b), and P3 (c) coding regions of EV-C strains.

Jing Lu (120666)
Huanying Zheng (169617)
Yong Zhang (5893)
Xue Guo (307988)
De Wu (517017)
Hui Li (32376)
Leng Liu (169619)
Hanri Zeng (307984)
Lina Yi (136385)
Ling Fang (139421)
Yanling Mo (517018)
Wenbo Xu (148718)
Changwen Ke (307989)

January 2014

The five EV-96 strains with available full genome sequences were included. The locations of the G...

Phylogenetic analysis of eight CV-A16 full-length genomic sequences isolated from HFMD patients in Changchun, China.

Wei Wei (21173)
Haoran Guo (433038)
Jingliang Li (552203)
Sangsang Ren (552204)
Zhenhong Wei (433039)
Wanguo Bao (327991)
Xiaoming Hu (552205)
Ke Zhao (248186)
Wenyan Zhang (327993)
Yulai Zhou (460655)
Fei Sun (102854)
Richard Markham (552206)
Xiao-Fang Yu (248189)

April 2014

(A)The complete genomic sequences of 3 other CV-A16 strains from China and all of the 21 HEV refe...

Phylogenetic analysis of CVA10 strains detected in this study and reference strains based on partial VP1 sequences.

Wan-Yu Chung (439059)
Pai-Shan Chiang (183435)
Shu-Ting Luo (183441)
Tzou-Yien Lin (110829)
Kuo-Chien Tsao (110815)
Min-Shi Lee (183427)

December 2016

The reference strains were selected based on geographical and chronological distributions. The ph...

Phylogenetic analysis of seven Changchun strains and GenBank database sequences of the EV71 strains from other provinces in China.

Xiaomei Wang (146367)
Chunfeng Zhu (327990)
Wanguo Bao (327991)
Ke Zhao (248186)
Junqi Niu (133004)
Xiao-Fang Yu (248189)
Wenyan Zhang (327993)

February 2013

A: Based on the complete genome sequence, B: Based on the VP1 region sequence, C: Based on the 5′...

Phylogenetic analysis of species HAdV-C strains (undefined HAdV type) collected in Beijing.

Meng Chen (48769)
Zhen Zhu (104773)
Fang Huang (154302)
Donglei Liu (713824)
Tiegang Zhang (713825)
Deng Ying (713826)
Jiang Wu (174815)
Wenbo Xu (148718)

March 2015

(a) the entire penton gene; (b) sequence alignment of partial penton gene; (c) the entire hexon g...

Phylogenetic trees for PB2, PB1 and PA genes collected from mainland China between 2011 and 2014.

Rui Zhu (305217)
Danwen Xu (5478662)
Xueqin Yang (5478665)
Jianjun Zhang (220300)
Shifeng Wang (364106)
Huoying Shi (364104)
Xiufan Liu (26081)

July 2018

Solid squares indicate representative strains, solid circles indicate the strains isolated in thi...

Phylogenetic tree based on neighbour-joining analysis of 78 HRV-A VP4/VP2 (A) and 14 HRV-B and 59 HRV-C VP4/VP2 (B) sequences from the present study and database reference strains.

Cristina Daleno (397768)
Antonio Piralla (120455)
Alessia Scala (397769)
Laura Senatore (486831)
Nicola Principi (397771)
Susanna Esposito (397772)

November 2013

The coloured dots indicate the sampling season: blue, 2007-2008; green, 2008-2009; pink, 2009-201...

Phylogenetic analysis of P2 and P3 regions of eight circulating Changchun CV-A16 strains.

Wei Wei (21173)
Haoran Guo (433038)
Jingliang Li (552203)
Sangsang Ren (552204)
Zhenhong Wei (433039)
Wanguo Bao (327991)
Xiaoming Hu (552205)
Ke Zhao (248186)
Wenyan Zhang (327993)
Yulai Zhou (460655)
Fei Sun (102854)
Richard Markham (552206)
Xiao-Fang Yu (248189)

April 2014

(A) Phylogenetic analysis of the P2 and P3 sequences of circulating CV-A16 stains (nucleotides 33...

Phylogenetic analysis of the partial NS5B ORF sequences from EqHV.

Gang Lu (19958)
Lingshuang Sun (2793334)
Tao Xu (3537)
Dong He (553311)
Zengchao Wang (2793325)
Shudan Ou (2793328)
Kun Jia (747683)
Liguo Yuan (2793331)
Shoujun Li (572627)

May 2016

The field strains from China are indicated in green. Two distinct lineages for clades 1 and 2 are...

Phylogenetic tree based on CVB1 VP1 sequences of Shandong isolates and global strains.

Zexin Tao (502134)
Haiyan Wang (25821)
Yan Li (23143)
Guifang Liu (516591)
Aiqiang Xu (148695)
Xiaojuan Lin (267520)
Lizhi Song (148709)
Feng Ji (525838)
Suting Wang (502136)
Ning Cui (502137)
Yanyan Song (408130)

February 2014

Circles indicate strains obtained in this study, triangles indicate Shandong AFP strains.</p

Phylogenetic tree based on the entire VP1 nucleotide sequences (852 bp) of the CVB3 strains.

Huifang Tian (285755)
Yong Zhang (5893)
Qiang Sun (225630)
Shuangli Zhu (195480)
Xiujuan Li (403680)
Zhuo Pan (505122)
Wenbo Xu (148718)
Baohong Xu (505123)

January 2014

12 CVB3 isolates from this study and 46 CVB3 strains worldwide were used to build the tree. Boots...

Phylogenetic analyses of the six Inner Mongolia CVB4 strains and reference strains from GenBank using the 852-bp VP1 region sequence.

Xiaoling Tian (529803)
Yong Zhang (5893)
Suyi Gu (169631)
Yaochun Fan (529804)
Qiang Sun (225630)
Bo Zhang (6559)
Shaohong Yan (529805)
Wenbo Xu (148718)
Xueen Ma (529806)
Wenrui Wang (529807)

March 2014

The strains indicated by blue squares are the CVB4 strains isolated in this study; the strain ind...

Phylogenetic tree based on complete genome of Chinese mainland EV71.

Yan Zhang (8098)
Xiaojuan Tan (195499)
Aili Cui (203513)
Naiying Mao (282774)
Songtao Xu (169593)
Zhen Zhu (104773)
Jianhui Zhou (141895)
Jing Shi (16730)
Yueping Zhao (282775)
Xianjun Wang (132239)
Xueyong Huang (149227)
Shuangli Zhu (195480)
Yong Zhang (5893)
Wei Tang (53470)
Hua Ling (235402)
Wenbo Xu (148718)

February 2013

Red dots indicate the sequences from Mainland China and blue triangles indicate the sequences dow...

Phylogenetic analysis of the 5′UTR and P1 regions of eight circulating Changchun CV-A16 strains.

Wei Wei (21173)
Haoran Guo (433038)
Jingliang Li (552203)
Sangsang Ren (552204)
Zhenhong Wei (433039)
Wanguo Bao (327991)
Xiaoming Hu (552205)
Ke Zhao (248186)
Wenyan Zhang (327993)
Yulai Zhou (460655)
Fei Sun (102854)
Richard Markham (552206)
Xiao-Fang Yu (248189)

April 2014

(A) The neighbor-joining tree was generated based on the 5′UTR sequences (nucleotide 24–718 using...

Phylogenetic trees constructed based on the entire VP1 nucleotide sequences of CV-A2 strains isolated between 1947 and 2017.

Qian Yang (300330)
Xinrui Gu (3605918)
Yong Zhang (5893)
Haiyan Wei (1613839)
Qi Li (67548)
Huan Fan (487588)
Yi Xu (131145)
Jie Li (15030)
Zhaolin Tan (5775332)
Yang Song (88132)
Dongmei Yan (195489)
Tianjiao Ji (1396918)
Shuangli Zhu (195480)
Wenbo Xu (148718)

September 2018

The CV-A2 strains isolated in the present study are indicated by solid circles. Numbers at the nodes...

Phylogenetic trees constructed based on the P1 (a), P2 (b), and P3 (c) coding regions of EV-C strains.

Jing Lu (120666)
Huanying Zheng (169617)
Yong Zhang (5893)
Xue Guo (307988)
De Wu (517017)
Hui Li (32376)
Leng Liu (169619)
Hanri Zeng (307984)
Lina Yi (136385)
Ling Fang (139421)
Yanling Mo (517018)
Wenbo Xu (148718)
Changwen Ke (307989)

January 2014

The five EV-96 strains with available full genome sequences were included. The locations of the G...

Phylogenetic analysis of eight CV-A16 full-length genomic sequences isolated from HFMD patients in Changchun, China.

Wei Wei (21173)
Haoran Guo (433038)
Jingliang Li (552203)
Sangsang Ren (552204)
Zhenhong Wei (433039)
Wanguo Bao (327991)
Xiaoming Hu (552205)
Ke Zhao (248186)
Wenyan Zhang (327993)
Yulai Zhou (460655)
Fei Sun (102854)
Richard Markham (552206)
Xiao-Fang Yu (248189)

April 2014

(A)The complete genomic sequences of 3 other CV-A16 strains from China and all of the 21 HEV refe...

Phylogenetic analysis of CVA10 strains detected in this study and reference strains based on partial VP1 sequences.

Wan-Yu Chung (439059)
Pai-Shan Chiang (183435)
Shu-Ting Luo (183441)
Tzou-Yien Lin (110829)
Kuo-Chien Tsao (110815)
Min-Shi Lee (183427)

December 2016

The reference strains were selected based on geographical and chronological distributions. The ph...

Phylogenetic analysis of seven Changchun strains and GenBank database sequences of the EV71 strains from other provinces in China.

Xiaomei Wang (146367)
Chunfeng Zhu (327990)
Wanguo Bao (327991)
Ke Zhao (248186)
Junqi Niu (133004)
Xiao-Fang Yu (248189)
Wenyan Zhang (327993)

February 2013

A: Based on the complete genome sequence, B: Based on the VP1 region sequence, C: Based on the 5′...

Phylogenetic analysis of species HAdV-C strains (undefined HAdV type) collected in Beijing.

Meng Chen (48769)
Zhen Zhu (104773)
Fang Huang (154302)
Donglei Liu (713824)
Tiegang Zhang (713825)
Deng Ying (713826)
Jiang Wu (174815)
Wenbo Xu (148718)

March 2015

(a) the entire penton gene; (b) sequence alignment of partial penton gene; (c) the entire hexon g...

Phylogenetic trees for PB2, PB1 and PA genes collected from mainland China between 2011 and 2014.

Rui Zhu (305217)
Danwen Xu (5478662)
Xueqin Yang (5478665)
Jianjun Zhang (220300)
Shifeng Wang (364106)
Huoying Shi (364104)
Xiufan Liu (26081)

July 2018

Solid squares indicate representative strains, solid circles indicate the strains isolated in thi...

Phylogenetic tree based on neighbour-joining analysis of 78 HRV-A VP4/VP2 (A) and 14 HRV-B and 59 HRV-C VP4/VP2 (B) sequences from the present study and database reference strains.

Cristina Daleno (397768)
Antonio Piralla (120455)
Alessia Scala (397769)
Laura Senatore (486831)
Nicola Principi (397771)
Susanna Esposito (397772)

November 2013

The coloured dots indicate the sampling season: blue, 2007-2008; green, 2008-2009; pink, 2009-201...

Phylogenetic analysis of P2 and P3 regions of eight circulating Changchun CV-A16 strains.

Wei Wei (21173)
Haoran Guo (433038)
Jingliang Li (552203)
Sangsang Ren (552204)
Zhenhong Wei (433039)
Wanguo Bao (327991)
Xiaoming Hu (552205)
Ke Zhao (248186)
Wenyan Zhang (327993)
Yulai Zhou (460655)
Fei Sun (102854)
Richard Markham (552206)
Xiao-Fang Yu (248189)

April 2014

(A) Phylogenetic analysis of the P2 and P3 sequences of circulating CV-A16 stains (nucleotides 33...

Phylogenetic analysis of the partial NS5B ORF sequences from EqHV.

Gang Lu (19958)
Lingshuang Sun (2793334)
Tao Xu (3537)
Dong He (553311)
Zengchao Wang (2793325)
Shudan Ou (2793328)
Kun Jia (747683)
Liguo Yuan (2793331)
Shoujun Li (572627)

May 2016

The field strains from China are indicated in green. Two distinct lineages for clades 1 and 2 are...

Phylogenetic tree based on VP1 sequences of CVA4, CVA10 and CVA16 among Shandong isolates and reference strains.

Abstract

Extracted data

Phylogenetic tree based on VP1 sequences of CVA4, CVA10 and CVA16 among Shandong isolates and reference strains.

Abstract

Extracted data

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