Performance Analysis of RNA CoMPASS.

<p>RNA CoMPASS was deployed on a local cluster and benchmarking was performed. An Akata RNA-seq data set was split into six files of varying sizes: 1–393.4 MB, 1,397,139 reads, 2–757 MB, 2,685,149 reads, 3–1.44 GB, 5,120,805 reads, 4–2.72 GB, 9,651,466 reads, 5–5.01 GB, 25,465,406 reads, sample 6–8.99 GB, 50,930,812 reads. Overall time was calculated for each file on a single machine (blue column) and on the local 4-node cluster (red column). Speedup time is represented as a green line.