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Overview of the workflow.

Ting Wang (16292)
Xi Zeng (129687)
Weiyang Li (436908)
Haijun Zhu (533051)
Guan Wang (109695)
Xiao Liu (65413)
Yonggang Lv (232420)
Jinghua Wu (436901)
Xuehan Zhuang (533052)
Juliang Zhang (406510)
Yi Zhao (14034)
Haodong Huang (533053)
Jing Fan (149601)
Qing Yao (56578)
Chenyang He (533054)
Xiuqing Zhang (133860)
Chen Huang (202847)
Jianghao Chen (56576)
Ling Wang (56577)

Publication date

March 2014

DOI

10.1371/journal.pone.0090343.g001

Abstract

<p>It shows the pipeline of experimental process and bioinformatics process for this study.</p

Extracted data

Related items

The overview of the workflow performed to select a small library of the mutants.

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Patryk Kapica (11933746)
Katarzyna Papaj (11933740)
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Patrycja Spychalska (11933743)
Anna Byczek-Wyrostek (5738804)
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February 2023

The overview of the workflow performed to select a small library of the mutants.</p

Detailed workflow of bioinformatics pipeline and taxonomic classification of HPV.

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Thiciane Araújo Chaves (774893)
Lucia Dayanny da Costa Amorim (774894)
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July 2015

<p>Detailed workflow of bioinformatics pipeline and taxonomic classification of HPV.</p

Workflow of the proposed method to identify cancer related genes and functional modules.

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Kening Li (710284)
Rui Zhang (13940)
Fujun Qiu (710285)
Ning Zhao (84707)
Yan Xu (14594)

March 2015

<p>Workflow of the proposed method to identify cancer related genes and functional modules.</p

Experimental work flow showing the steps carried out and bioinformatic utilities used for a transcriptome analysis.

Victor M. Guerrero-Sanchez (6236651)
Ana M. Maldonado-Alconada (5501393)
Francisco Amil-Ruiz (441299)
Andrea Verardi (6236654)
Jesús V. Jorrín-Novo (5573480)
María-Dolores Rey (638379)

January 2019

Experimental work flow showing the steps carried out and bioinformatic utilities used for a transcri...

Overview of experimental workflow.

Matthew D. Dyer (204335)
Chris Neff (362668)
Max Dufford (362669)
Corban G. Rivera (19353)
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Josep Bassaganya-Riera (120051)
T. M. Murali (19354)
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February 2013

<p>A) Overview of analysis pipeline used in this study. B) Venn diagram displaying the number of hum...

Overview of Bioinformatic workflows.

Joakim Crona (147714)
Viktor Ljungström (778129)
Staffan Welin (778130)
Martin K. Walz (147836)
Per Hellman (15500)
Peyman Björklund (15495)

July 2015

<p>Schematic description of the utilized workflows MiSEQ Reporter 2.1.43 (Illumina inc), CLC Genomic...

Bioinformatics workflow.

Robert King (2499592)
Nicholas Bird (791974)
Ricardo Ramirez-Gonzalez (384650)
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Archana Patil (791976)
Keywan Hassani-Pak (791977)
Cristobal Uauy (779399)
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September 2015

<p>Each stage in the analysis pipeline is in a separate box with program and parameters in red.</p

Experimental workflow design, and proteomics data acquisition and analysis.

Michael Caruso (813475)
Xiangmin Zhang (813476)
Danjun Ma (813477)
Zhao Yang (358244)
Yue Qi (146647)
Zhengping Yi (201356)

October 2015

<p>(A). Experimental workflow design. (B). Proteomics data acquisition and downstream analysis.</p

The workflow of the presented study, combining <i>in silico</i> and <i>in vitro</i> approaches.

Rok Martinčič (814530)
Janez Mravljak (814531)
Urban Švajger (188218)
Andrej Perdih (158352)
Marko Anderluh (814532)
Marjana Novič (158377)

October 2015

<p>The workflow of the presented study, combining <i>in silico</i> and <i>in vitro</i> approaches.</...

The workflow of experimental approaches adopted for miRNA and mRNA expression analysis.

Dragan Milenkovic (188858)
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Erwan Gouranton (188859)
Jean-François Landrier (188860)
Augustin Scalbert (188861)
Christine Morand (188862)
Andrzej Mazur (188863)

January 2012

<p>The workflow of experimental approaches adopted for miRNA and mRNA expression analysis.</p

Summary of the bioinformatic pipelines after sequencing, showing results obtained in some steps.

Paloma S. Moreno (4060111)
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Caroline S. Mansfield (639163)
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June 2017

<p>Summary of the bioinformatic pipelines after sequencing, showing results obtained in some steps.<...

Workflow from gene screening, through gene selection, to experimental identification of a disease predictor.

Vardit Moshayoff (3147951)
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Luigi Laghi (17644)
Giuseppe Celesti (306470)
Tamar Peretz (373411)
Dan Keret (3147948)
Dana Cohen (306366)
Eran Israeli (3147954)

July 2016

<p>Workflow from gene screening, through gene selection, to experimental identification of a disease...

Overview of Analytic Workflow.

Nicholas F. Marko (123844)
Robert J. Weil (123848)

October 2012

<p>The flow diagram depicts typical microarray analysis workflow (top section), the statistical meth...

Overview of the pipeline presented in this work.

Juliana Costa-Silva (4710331)
Douglas Domingues (3423098)
Fabricio Martins Lopes (4710330)

December 2017

<p>The adopted biological samples to generate the qRT-PCR data were the same as those used to genera...

Izabela M. Zakiewicz (347241)
Yvette C. van Dongen (347242)
Trygve B. Leergaard (94896)
Jan G. Bjaalie (94897)

February 2013

<p>(A) Flowchart showing four processing steps, beginning with an animal submitted to an axonal trac...

The overview of the workflow performed to select a small library of the mutants.

Agata Raczyńska (5632502)
Patryk Kapica (11933746)
Katarzyna Papaj (11933740)
Agnieszka Stańczak (14675851)
Divine Shyntum (14675854)
Patrycja Spychalska (11933743)
Anna Byczek-Wyrostek (5738804)
Artur Góra (5400632)

February 2023

The overview of the workflow performed to select a small library of the mutants.</p

Detailed workflow of bioinformatics pipeline and taxonomic classification of HPV.

Allex Jardim Fonseca (774891)
Daniela Taeko (774892)
Thiciane Araújo Chaves (774893)
Lucia Dayanny da Costa Amorim (774894)
Raisa Saron Wanderley Murari (774895)
Angélica Espinosa Miranda (591259)
Zigui Chen (153298)
Robert David Burk (774896)
Luiz Carlos Lima Ferreira (774897)

July 2015

<p>Detailed workflow of bioinformatics pipeline and taxonomic classification of HPV.</p

Workflow of the proposed method to identify cancer related genes and functional modules.

Yuanshuai Zhou (710282)
Yongjing Liu (710283)
Kening Li (710284)
Rui Zhang (13940)
Fujun Qiu (710285)
Ning Zhao (84707)
Yan Xu (14594)

March 2015

<p>Workflow of the proposed method to identify cancer related genes and functional modules.</p

Experimental work flow showing the steps carried out and bioinformatic utilities used for a transcriptome analysis.

Victor M. Guerrero-Sanchez (6236651)
Ana M. Maldonado-Alconada (5501393)
Francisco Amil-Ruiz (441299)
Andrea Verardi (6236654)
Jesús V. Jorrín-Novo (5573480)
María-Dolores Rey (638379)

January 2019

Experimental work flow showing the steps carried out and bioinformatic utilities used for a transcri...

Overview of experimental workflow.

Matthew D. Dyer (204335)
Chris Neff (362668)
Max Dufford (362669)
Corban G. Rivera (19353)
Donna Shattuck (9741)
Josep Bassaganya-Riera (120051)
T. M. Murali (19354)
Bruno W. Sobral (85497)

February 2013

<p>A) Overview of analysis pipeline used in this study. B) Venn diagram displaying the number of hum...

Overview of Bioinformatic workflows.

Joakim Crona (147714)
Viktor Ljungström (778129)
Staffan Welin (778130)
Martin K. Walz (147836)
Per Hellman (15500)
Peyman Björklund (15495)

July 2015

<p>Schematic description of the utilized workflows MiSEQ Reporter 2.1.43 (Illumina inc), CLC Genomic...

Bioinformatics workflow.

Robert King (2499592)
Nicholas Bird (791974)
Ricardo Ramirez-Gonzalez (384650)
Jane A. Coghill (791975)
Archana Patil (791976)
Keywan Hassani-Pak (791977)
Cristobal Uauy (779399)
Andrew L. Phillips (407677)

September 2015

<p>Each stage in the analysis pipeline is in a separate box with program and parameters in red.</p

Experimental workflow design, and proteomics data acquisition and analysis.

Michael Caruso (813475)
Xiangmin Zhang (813476)
Danjun Ma (813477)
Zhao Yang (358244)
Yue Qi (146647)
Zhengping Yi (201356)

October 2015

<p>(A). Experimental workflow design. (B). Proteomics data acquisition and downstream analysis.</p

The workflow of the presented study, combining <i>in silico</i> and <i>in vitro</i> approaches.

Rok Martinčič (814530)
Janez Mravljak (814531)
Urban Švajger (188218)
Andrej Perdih (158352)
Marko Anderluh (814532)
Marjana Novič (158377)

October 2015

<p>The workflow of the presented study, combining <i>in silico</i> and <i>in vitro</i> approaches.</...

The workflow of experimental approaches adopted for miRNA and mRNA expression analysis.

Dragan Milenkovic (188858)
Christiane Deval (25566)
Erwan Gouranton (188859)
Jean-François Landrier (188860)
Augustin Scalbert (188861)
Christine Morand (188862)
Andrzej Mazur (188863)

January 2012

<p>The workflow of experimental approaches adopted for miRNA and mRNA expression analysis.</p

Summary of the bioinformatic pipelines after sequencing, showing results obtained in some steps.

Paloma S. Moreno (4060111)
Josef Wagner (212644)
Caroline S. Mansfield (639163)
Matthew Stevens (4060108)
James R. Gilkerson (558794)
Carl D. Kirkwood (90160)

June 2017

<p>Summary of the bioinformatic pipelines after sequencing, showing results obtained in some steps.<...

Workflow from gene screening, through gene selection, to experimental identification of a disease predictor.

Vardit Moshayoff (3147951)
Ouriel Faktor (3147945)
Luigi Laghi (17644)
Giuseppe Celesti (306470)
Tamar Peretz (373411)
Dan Keret (3147948)
Dana Cohen (306366)
Eran Israeli (3147954)

July 2016

<p>Workflow from gene screening, through gene selection, to experimental identification of a disease...

Overview of Analytic Workflow.

Nicholas F. Marko (123844)
Robert J. Weil (123848)

October 2012

<p>The flow diagram depicts typical microarray analysis workflow (top section), the statistical meth...

Overview of the pipeline presented in this work.

Juliana Costa-Silva (4710331)
Douglas Domingues (3423098)
Fabricio Martins Lopes (4710330)

December 2017

<p>The adopted biological samples to generate the qRT-PCR data were the same as those used to genera...

Izabela M. Zakiewicz (347241)
Yvette C. van Dongen (347242)
Trygve B. Leergaard (94896)
Jan G. Bjaalie (94897)

February 2013

<p>(A) Flowchart showing four processing steps, beginning with an animal submitted to an axonal trac...

The overview of the workflow performed to select a small library of the mutants.

Agata Raczyńska (5632502)
Patryk Kapica (11933746)
Katarzyna Papaj (11933740)
Agnieszka Stańczak (14675851)
Divine Shyntum (14675854)
Patrycja Spychalska (11933743)
Anna Byczek-Wyrostek (5738804)
Artur Góra (5400632)

February 2023

The overview of the workflow performed to select a small library of the mutants.</p

Detailed workflow of bioinformatics pipeline and taxonomic classification of HPV.

Allex Jardim Fonseca (774891)
Daniela Taeko (774892)
Thiciane Araújo Chaves (774893)
Lucia Dayanny da Costa Amorim (774894)
Raisa Saron Wanderley Murari (774895)
Angélica Espinosa Miranda (591259)
Zigui Chen (153298)
Robert David Burk (774896)
Luiz Carlos Lima Ferreira (774897)

July 2015

<p>Detailed workflow of bioinformatics pipeline and taxonomic classification of HPV.</p

Workflow of the proposed method to identify cancer related genes and functional modules.

Yuanshuai Zhou (710282)
Yongjing Liu (710283)
Kening Li (710284)
Rui Zhang (13940)
Fujun Qiu (710285)
Ning Zhao (84707)
Yan Xu (14594)

March 2015

<p>Workflow of the proposed method to identify cancer related genes and functional modules.</p