<p>Three structure alignment tools (TMalign, Matt and DeepAlign) are used to generate reference alignments. “4-offset” means that 4-position off the exact match is allowed. The bold indicates the best results.</p
<p>The topology structure improves the alignment accuracy of TMFR<sup>α</sup> (TMFR for αTMPs) compa...
Contains reference alignments and BAli-Phy Posterior Decoding alignments for all data referred to in...
The comparison of five baseline tools in terms of the number of accurate unique alignments out of 20...
<p>See <a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1003500#pcbi-10035...
<p>See <a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1003500#pcbi-10035...
<p>The protein pairs are divided into 3 groups based upon the SCOP classification. The bold indicate...
<p>Reference dependent alignment accuracy (%) for different methods on the test sets.</p
Global alignment was performed with minimum block size 4 (Block 4). Block 1 is the results of refine...
<p>The protein pairs are divided into 3 groups based upon the SCOP classification. The bold indicate...
<p>The dependence of alignment precision (dotted lines ), recall (dashed lines ) and -measure (solid...
Background: Multiple sequence alignment algorithms are very important tools in molecular biology tod...
<p>Results are sorted according to the level of sequence similarity of the sequence pair, in percent...
Schematic representation of multiple alignments of one read (A) against more than one reference (B)....
<p>Proportion of aligned reads in each steps of the alignment process and proportion of unaligned re...
The plot shows the average precision and recall of the initial and refined alignments in two test se...
<p>The topology structure improves the alignment accuracy of TMFR<sup>α</sup> (TMFR for αTMPs) compa...
Contains reference alignments and BAli-Phy Posterior Decoding alignments for all data referred to in...
The comparison of five baseline tools in terms of the number of accurate unique alignments out of 20...
<p>See <a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1003500#pcbi-10035...
<p>See <a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1003500#pcbi-10035...
<p>The protein pairs are divided into 3 groups based upon the SCOP classification. The bold indicate...
<p>Reference dependent alignment accuracy (%) for different methods on the test sets.</p
Global alignment was performed with minimum block size 4 (Block 4). Block 1 is the results of refine...
<p>The protein pairs are divided into 3 groups based upon the SCOP classification. The bold indicate...
<p>The dependence of alignment precision (dotted lines ), recall (dashed lines ) and -measure (solid...
Background: Multiple sequence alignment algorithms are very important tools in molecular biology tod...
<p>Results are sorted according to the level of sequence similarity of the sequence pair, in percent...
Schematic representation of multiple alignments of one read (A) against more than one reference (B)....
<p>Proportion of aligned reads in each steps of the alignment process and proportion of unaligned re...
The plot shows the average precision and recall of the initial and refined alignments in two test se...
<p>The topology structure improves the alignment accuracy of TMFR<sup>α</sup> (TMFR for αTMPs) compa...
Contains reference alignments and BAli-Phy Posterior Decoding alignments for all data referred to in...
The comparison of five baseline tools in terms of the number of accurate unique alignments out of 20...
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